Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120553063 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 11092190 ~ 11092674 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638092.1 | True | 134 | lncRNA | 0.50 | 3 | 11092190 | 11092674 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120553009 | NA | coding | upstream | 68432 | 11019226 ~ 11023758 (+) |
| si:dkeyp-38g8.5 | NA | coding | upstream | 418139 | 10672048 ~ 10674051 (+) |
| scyl2 | NA | coding | upstream | 433179 | 10648321 ~ 10659011 (+) |
| depdc4 | depdc4 | coding | upstream | 448419 | 10638588 ~ 10643771 (+) |
| anks1b | anks1b | coding | upstream | 569953 | 10288477 ~ 10522237 (+) |
| lrrc4.1 | LOC104918788,LOC103365345,LOC100694050 | coding | downstream | 270089 | 11362763 ~ 11367955 (+) |
| pax4 | NA | coding | downstream | 360786 | 11453460 ~ 11456592 (+) |
| LOC120553760 | NA | coding | downstream | 719353 | 11812027 ~ 11822653 (+) |
| LOC120553761 | NA | coding | downstream | 722439 | 11815113 ~ 11822653 (+) |
| LOC120553244 | LOC103365396,LOC108235086,LOC101484317,LOC107085982 | coding | downstream | 733635 | 11826309 ~ 11836976 (+) |
| G227217 | NA | non-coding | upstream | 37995 | 11043412 ~ 11054195 (+) |
| G227204 | NA | non-coding | upstream | 80875 | 11011114 ~ 11011315 (+) |
| G227184 | NA | non-coding | upstream | 115876 | 10956484 ~ 10976314 (+) |
| LOC120553015 | NA | non-coding | upstream | 123942 | 10967639 ~ 10968248 (+) |
| G227177 | NA | non-coding | upstream | 156445 | 10935104 ~ 10935745 (+) |
| G227221 | NA | non-coding | downstream | 94265 | 11186939 ~ 11187782 (+) |
| G227251 | NA | non-coding | downstream | 367439 | 11460113 ~ 11460500 (+) |
| G227267 | NA | non-coding | downstream | 531561 | 11624235 ~ 11627943 (+) |
| G227338 | iqsec3 | non-coding | downstream | 897426 | 11990100 ~ 11992952 (+) |
| G227363 | NA | non-coding | downstream | 1150860 | 12243534 ~ 12243755 (+) |
| impdh1b | LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 | other | upstream | 105989 | 10948285 ~ 10986201 (+) |
| G227141 | dcn,LOC103382665 | other | upstream | 354687 | 10732069 ~ 10737503 (+) |
| G227121 | kera | other | upstream | 392472 | 10697254 ~ 10699718 (+) |
| ndufb2 | ndufb2,LOC102790702 | other | upstream | 1850841 | 9237226 ~ 9241349 (+) |
| lhfpl3 | lhfpl3,LOC101483460 | other | upstream | 1918970 | 9134594 ~ 9173220 (+) |
| G227216 | NA | other | downstream | 10162 | 11102836 ~ 11112905 (+) |
| G227278 | LOC104928793 | other | downstream | 596495 | 11689169 ~ 11757317 (+) |
| st8sia1 | st8sia1 | other | downstream | 1014278 | 12106952 ~ 12126545 (+) |
| plxna4 | plxna4 | other | downstream | 1566594 | 12659268 ~ 12910189 (+) |
| nrf1 | nrf1,LOC103372774 | other | downstream | 1912665 | 13005339 ~ 13022947 (+) |
