LOC120553072


Basic Information

Item Value
gene id LOC120553072
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23969947 ~ 23971613 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638093.1
GTCCAAGCTTCTCCCAGCATGCTTTTCTGAGCAGCTGATCGGGGTTTACAGTAGGAAGACTGATGAGCAGAGTGTGGATGCTAGACAGAAAGGACTTGGACCAGTGGTGTAAAGATAAGGGCTGGCCAAACCCTCAGTATGGAGACACTGCAACACCGTAAATCATCCCTGGGGGAAATATCCAGAACAACCCACCAGAGGTTATGGAAAATAGAGATTAAAAGTgagaaaagaaagcaaatacTCCCTGCTACTTATTGGTTATAATGATTGAATCTATAAGGTGTATGATCACAGTGTAGTATAGATACCACATTTCTCTCCAAAAACAAATGATTTCAGAGTACCAGGATACATTACTACATGTTTGGGTCATATACTCAGTTTCTTTAGAGCCCTGTTCAACACTGAACACATATCTTTGTTTTAGTTTGATCATTAAACACACTTTACAGTTAATGTCTCACACTCCTTCATGTCTTGGTCTAAACTGAAGCATATTTTAGATCATTGTTTTATATCCGTCACATTTATGCTTCTCTGTGTATTCTGTGTGTATTCCTTATAATCAGGGCACGCTGTAAAGCACTACCCACATGGAGTGGACTTAAAGTGAATATTTAAATTGTGGTTTTGGGCTTTCAAATATTAAGGGGTGTTTGGTTTTTATGTTAATCATGTGCATTGATGTGATCATGATGGATctgattatatattatatggTAAGCTCTGACTTGGGAAGCACTTTGTAGAAGAATCATGATTactattaaaattaaataaaaaattgaattaTTAACATAATGATTACTTTatatcaggggtcttcaacgctttttaagccaaggaccccttaactgaaagagagatggagcagggaccccctaccacatatattgtatgaaaaGAAGTTGCtcattaaactgggcctacaatactGTGTGGGTGGCCTAAAGTCTTTATATATACCTTTTTTGCAAAGAATACTGTATATCACTATTTCTTACTGTATTCATACTATATAGCTTCACTATTTTAATGTAACCATCTGAGTGTGGTGAAGACAAACTTTCGATATCGTTGTGTTTTGCTCATGGAGTGAAAATATGTTAGATTCTTAATATATATTTGGGGCTGTAAAGGGAAACCTACCAAAGTTATTTGAGCCTTTATACTTCATCCCCCACTAAGACATGTTGATGACAGATTGTGCCTGCTctatttgaaataaaatataaaaaatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638093.1 True 1246 lncRNA 0.36 2 23969947 23971613

Neighbor

gene id symbol gene type direction distance location
asb13a.1 LOC103363234,LOC100709988,LOC105929846,LOC101482319,LOC102215476,LOC108241840 coding upstream 36071 23924156 ~ 23933876 (+)
gdi2 gdi2,LOC104923747 coding upstream 56134 23899241 ~ 23913813 (+)
ankrd16 ankrd16,LOC102787719 coding upstream 72049 23886747 ~ 23897898 (+)
trnay-gua_62 NA coding upstream 82523 23887337 ~ 23887424 (+)
ppp6r2a LOC104923754 coding upstream 262979 23686003 ~ 23706968 (+)
mkln1 mkln1 coding downstream 238006 24209619 ~ 24249507 (+)
ift46 LOC107372934 coding downstream 330152 24301765 ~ 24308444 (+)
LOC120553464 LOC107381693,LOC105020203 coding downstream 348663 24320276 ~ 24365349 (+)
chst11 chst11 coding downstream 413285 24384898 ~ 24478763 (+)
nopchap1 LOC104942935 coding downstream 594628 24566241 ~ 24571321 (+)
G229945 NA non-coding upstream 21409 23947693 ~ 23948538 (+)
G229938 NA non-coding upstream 53559 23915811 ~ 23916388 (+)
G229841 cbll1 non-coding upstream 290639 23667703 ~ 23679308 (+)
G229821 dnajc2 non-coding upstream 384448 23579721 ~ 23585499 (+)
LOC120552982 NA non-coding upstream 712086 23232498 ~ 23257861 (+)
G229974 NA non-coding downstream 22953 23994566 ~ 23994835 (+)
G229976 net1 non-coding downstream 93601 24065214 ~ 24066989 (+)
LOC120553514 NA non-coding downstream 116412 24088025 ~ 24095165 (+)
G229994 NA non-coding downstream 141352 24112965 ~ 24116121 (+)
G230011 NA non-coding downstream 288446 24260059 ~ 24264065 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 24307 23934300 ~ 23945640 (+)
adm2a NA other upstream 121323 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 529284 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1226768 22739717 ~ 22743179 (+)
G229428 NA other upstream 2101650 21867201 ~ 21868297 (+)
LOC120553083 NA other downstream 337929 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 649199 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 1391269 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1670227 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1838794 25810407 ~ 25812828 (+)

Expression


Co-expression Network