Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120553126 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 6183044 ~ 6289899 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638108.1 | True | 325 | lncRNA | 0.48 | 3 | 6183044 | 6289899 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| echdc3 | echdc3,LOC102797483 | coding | upstream | 783741 | 5393640 ~ 5399303 (+) |
| kcnj8 | kcnj8 | coding | upstream | 790104 | 5383033 ~ 5392940 (+) |
| LOC120553019 | NA | coding | upstream | 944700 | 5235150 ~ 5238344 (+) |
| LOC120553055 | NA | coding | upstream | 1378802 | 4793287 ~ 4804242 (+) |
| dmtf1 | NA | coding | upstream | 1433802 | 4734262 ~ 4749242 (+) |
| kin | kin,LOC103372864 | coding | downstream | 223946 | 6513845 ~ 6519452 (+) |
| itih5 | itih5 | coding | downstream | 245276 | 6535175 ~ 6553086 (+) |
| sfmbt2 | sfmbt2 | coding | downstream | 289213 | 6579112 ~ 6636681 (+) |
| gnsa | gns,LOC102788091 | coding | downstream | 429209 | 6719108 ~ 6734409 (+) |
| LOC120553270 | NA | coding | downstream | 686433 | 6976332 ~ 6995588 (+) |
| G226097 | NA | non-coding | upstream | 85136 | 6097678 ~ 6097908 (+) |
| G226085 | NA | non-coding | upstream | 263630 | 5919094 ~ 5919414 (+) |
| G226042 | NA | non-coding | upstream | 406611 | 5750128 ~ 5776433 (+) |
| G226029 | NA | non-coding | upstream | 629719 | 5552521 ~ 5553325 (+) |
| G226028 | NA | non-coding | upstream | 630571 | 5552253 ~ 5552473 (+) |
| LOC120553621 | NA | non-coding | downstream | 139195 | 6429094 ~ 6501060 (+) |
| G226292 | eri1,LOC102785739 | non-coding | downstream | 867591 | 7157490 ~ 7157887 (+) |
| G226306 | ndufa12 | non-coding | downstream | 923493 | 7213392 ~ 7216386 (+) |
| G226316 | NA | non-coding | downstream | 977610 | 7267509 ~ 7268758 (+) |
| G226317 | NA | non-coding | downstream | 979205 | 7269104 ~ 7270753 (+) |
| abcc9 | abcc9,LOC107387088 | other | upstream | 809407 | 5281258 ~ 5373637 (+) |
| G225894 | NA | other | upstream | 1525075 | 4657444 ~ 4657969 (+) |
| LOC120553793 | NA | other | upstream | 2244090 | 3935674 ~ 3938954 (+) |
| LOC120553144 | rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 | other | upstream | 2341870 | 3814481 ~ 3841174 (+) |
| trnat-ugu_40 | NA | other | upstream | 2648372 | 3534600 ~ 3534672 (+) |
| prkcq | prkcq,LOC102789446 | other | downstream | 370621 | 6660520 ~ 6686639 (+) |
| snrpf | snrpf,LOC106576293 | other | downstream | 1028618 | 7318517 ~ 7321189 (+) |
| amdhd1 | amdhd1 | other | downstream | 1033171 | 7323070 ~ 7332259 (+) |
| klhl42 | klhl42 | other | downstream | 1073426 | 7363325 ~ 7368216 (+) |
| nrip2 | LOC102781986,LOC100711207,LOC102191975 | other | downstream | 1080543 | 7370442 ~ 7400399 (+) |
