LOC120553132



Basic Information


Item Value
gene id LOC120553132
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28876463 ~ 28877100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005638111.1
GCTTCACAACCTAGACTGGAGCAAGATGTTTCAGAGTGgtGTACTTGTGGAAATTGCTCGACAATGTCCACTGAAGTTGAAAACATCTGTTGCCAAGAAATACAAATggtTGTTACACAAATGCAACAGGTTCCTGTCCCACCTACCTGCATGGTTTACCATCCAGACCTAGAGCCAACCTGTTTGAACCACTACAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005638111.1 True 197 lncRNA 0.45 3 28876463 28877100

Neighbor


gene id symbol gene type direction distance location
trnag-gcc_23 NA coding upstream 17399 28858994 ~ 28859064 (+)
trnag-gcc_22 NA coding upstream 17740 28858653 ~ 28858723 (+)
trnag-gcc_21 NA coding upstream 18424 28857969 ~ 28858039 (+)
trnag-acc_1 NA coding upstream 19784 28856609 ~ 28856679 (+)
trnac-gca_37 NA coding upstream 20125 28856268 ~ 28856338 (+)
LOC120553059 NA coding downstream 213857 29090957 ~ 29099400 (+)
G231135 NA non-coding upstream 83718 28791960 ~ 28792745 (+)
G231132 NA non-coding upstream 104894 28770614 ~ 28771569 (+)
G231129 NA non-coding upstream 108833 28767321 ~ 28767630 (+)
G231125 NA non-coding upstream 130336 28745902 ~ 28746127 (+)
G231122 NA non-coding upstream 132125 28744071 ~ 28744338 (+)
G231166 NA non-coding downstream 97936 28975036 ~ 28975830 (+)
LOC120553663 NA non-coding downstream 151877 29028977 ~ 29031361 (+)
LOC120553830 NA non-coding downstream 179035 29056135 ~ 29056327 (+)
LOC120553845 NA non-coding downstream 179629 29056729 ~ 29056839 (+)
LOC120553828 NA non-coding downstream 180009 29057109 ~ 29057291 (+)
G231113 NA other upstream 230926 28645036 ~ 28645537 (+)
LOC120553776 NA other upstream 246451 28612555 ~ 28630012 (+)
LOC120553833 NA other upstream 375044 28501234 ~ 28501419 (+)
trnak-uuu_24 NA other upstream 405285 28471106 ~ 28471178 (+)
trnat-ugu_41 NA other upstream 405585 28470806 ~ 28470878 (+)
G231160 NA other downstream 109222 28986322 ~ 28992193 (+)

Expression



Co-expression Network