LOC120553708


Basic Information

Item Value
gene id LOC120553708
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25797989 ~ 25801309 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638198.1
ACAGGAGGTGGCAGTATGCAATAAGAAGTAAGGGTATTCATGTAACAAAAATCTGAAGACCTGCCCATTTCCGGCACGGGggggacagagacagaaagagagacggaaAAGGTCCAAGGGGGCATTTTCTGACAAGAAGGCTCCGAGGGAGAACCAGGACAGATGCACTTTTAAATCCCCCGCCCCCCAACCCTGGGCCATCTGggatccctcctccctccacctctGCCAAGTCAGGCTGCAGCACAcatcagcagagactgcagaacgtaagaCAACAGGAAGGGCGGGCCAGCGAGACGGAGCCGCCACCCCAGAGGCTCGGCCACCTTCAGTTTCTAGTCGACGCGAGCGTTCATGAAGCAACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638198.1 True 369 lncRNA 0.57 3 25797989 25801309

Neighbor

gene id symbol gene type direction distance location
dera dera coding upstream 18374 25768737 ~ 25779615 (+)
hmga2 hmga2 coding upstream 44174 25695881 ~ 25753815 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding upstream 157899 25621443 ~ 25640090 (+)
tmbim4 tmbim4 coding upstream 183544 25608506 ~ 25614445 (+)
cdnf LOC104964768 coding upstream 223967 25568539 ~ 25574022 (+)
il17ra1a NA coding downstream 344598 26145907 ~ 26158913 (+)
LOC120553199 LOC104965315 coding downstream 414832 26216141 ~ 26219357 (+)
cnot4b NA coding downstream 421480 26222789 ~ 26253935 (+)
braf braf coding downstream 585506 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 1218053 27019362 ~ 27044417 (+)
G230418 NA non-coding upstream 8733 25788606 ~ 25789256 (+)
G230417 NA non-coding upstream 20355 25777011 ~ 25777634 (+)
G230415 NA non-coding upstream 75503 25721653 ~ 25722486 (+)
G230404 NA non-coding upstream 178730 25618202 ~ 25619259 (+)
G230401 NA non-coding upstream 181318 25595592 ~ 25616671 (+)
G230488 NA non-coding downstream 254214 26055523 ~ 26055735 (+)
G230510 NA non-coding downstream 324723 26126032 ~ 26126398 (+)
G230520 NA non-coding downstream 370079 26171388 ~ 26173594 (+)
G230521 NA non-coding downstream 372337 26173646 ~ 26174741 (+)
G230525 NA non-coding downstream 378234 26179543 ~ 26180016 (+)
msrb3 msrb3 other upstream 135170 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 423993 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 1019731 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1483282 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1852349 23934300 ~ 23945640 (+)
LOC120553706 NA other downstream 9098 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 236879 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 571405 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 892047 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 1267768 27069077 ~ 27072552 (+)

Expression


Co-expression Network