LOC120553830



Basic Information


Item Value
gene id LOC120553830
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 29056135 ~ 29056327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005638231.1
GTGGCTTCCGGCCTTTTGGCTAGATCAAGTGTAGTATCTGTTCTTATcagtttaatatctgatatGTCCTCTATCAGGGGCGACGTACTATATAATGGATTTTTGCCCAATGGGAGTTGAAAGGGGGGCTTGTCCCTTCACTCCGCACGCTCGACCCGGTATTGCAAGCGCCGCCGAACGCGGTGCACCTTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005638231.1 True 193 snRNA 0.50 1 29056135 29056327

Neighbor


gene id symbol gene type direction distance location
trnag-gcc_23 NA coding upstream 197071 28858994 ~ 28859064 (+)
trnag-gcc_22 NA coding upstream 197412 28858653 ~ 28858723 (+)
trnag-gcc_21 NA coding upstream 198096 28857969 ~ 28858039 (+)
trnag-acc_1 NA coding upstream 199456 28856609 ~ 28856679 (+)
trnac-gca_37 NA coding upstream 199797 28856268 ~ 28856338 (+)
LOC120553059 NA coding downstream 34630 29090957 ~ 29099400 (+)
LOC120553663 NA non-coding upstream 24774 29028977 ~ 29031361 (+)
G231166 NA non-coding upstream 80305 28975036 ~ 28975830 (+)
LOC120553132 NA non-coding upstream 179035 28876463 ~ 28877100 (+)
G231135 NA non-coding upstream 263390 28791960 ~ 28792745 (+)
G231132 NA non-coding upstream 284566 28770614 ~ 28771569 (+)
LOC120553845 NA non-coding downstream 402 29056729 ~ 29056839 (+)
LOC120553828 NA non-coding downstream 782 29057109 ~ 29057291 (+)
LOC120553821 NA non-coding downstream 1771 29058098 ~ 29058294 (+)
LOC120553848 NA non-coding downstream 2373 29058700 ~ 29058815 (+)
LOC120553829 NA non-coding downstream 2772 29059099 ~ 29059288 (+)
G231160 NA other upstream 63942 28986322 ~ 28992193 (+)
G231113 NA other upstream 410598 28645036 ~ 28645537 (+)
LOC120553776 NA other upstream 426123 28612555 ~ 28630012 (+)
LOC120553833 NA other upstream 554716 28501234 ~ 28501419 (+)
trnak-uuu_24 NA other upstream 584957 28471106 ~ 28471178 (+)

Expression



Co-expression Network