trnat-cgu_9


Basic Information

Item Value
gene id trnat-cgu_9
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2885810 ~ 2885882 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1435
GGCTCCATAGCTCAGAGGTTAGAGCACTGGTCTCGTAAACCAGGGGTCGTGAGTTCAACTCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1435 True 73 tRNA 0.56 1 2885810 2885882

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_8 NA coding upstream 337 2885401 ~ 2885473 (+)
trnat-cgu_7 NA coding upstream 1872 2883866 ~ 2883938 (+)
trnat-ugu_10 NA coding upstream 2906 2882832 ~ 2882904 (+)
trnat-ugu_9 NA coding upstream 5620 2880118 ~ 2880190 (+)
trnat-ugu_8 NA coding upstream 6647 2879091 ~ 2879163 (+)
trnat-ugu_11 NA coding downstream 1162 2887044 ~ 2887116 (+)
trnat-ugu_12 NA coding downstream 4510 2890392 ~ 2890464 (+)
trnat-ugu_13 NA coding downstream 5888 2891770 ~ 2891842 (+)
trnat-ugu_14 NA coding downstream 6561 2892443 ~ 2892515 (+)
trnat-cgu_10 NA coding downstream 7666 2893548 ~ 2893620 (+)
G225377 NA non-coding upstream 105286 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 127403 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 247803 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 249709 2580720 ~ 2636101 (+)
G225419 NA non-coding downstream 49008 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 53506 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 67525 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 77507 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 162266 3048148 ~ 3051632 (+)
G225394 NA other upstream 35214 2850153 ~ 2850596 (+)
G225344 NA other upstream 122224 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 222676 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 391312 2479638 ~ 2494498 (+)
G224728 NA other upstream 588808 2163643 ~ 2297002 (+)
G225445 NA other downstream 244062 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 290658 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 466966 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 534481 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 624198 3510080 ~ 3510152 (+)

Expression


Co-expression Network