trnat-ugu_13


Basic Information

Item Value
gene id trnat-ugu_13
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2891770 ~ 2891842 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1438
GGCTACATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAATTCAATTCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1438 True 73 tRNA 0.52 1 2891770 2891842

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_12 NA coding upstream 1306 2890392 ~ 2890464 (+)
trnat-ugu_11 NA coding upstream 4654 2887044 ~ 2887116 (+)
trnat-cgu_9 NA coding upstream 5888 2885810 ~ 2885882 (+)
trnat-cgu_8 NA coding upstream 6297 2885401 ~ 2885473 (+)
trnat-cgu_7 NA coding upstream 7832 2883866 ~ 2883938 (+)
trnat-ugu_14 NA coding downstream 601 2892443 ~ 2892515 (+)
trnat-cgu_10 NA coding downstream 1706 2893548 ~ 2893620 (+)
trnai-uau_28 NA coding downstream 3442 2895284 ~ 2895356 (+)
trnat-ugu_15 NA coding downstream 4120 2895962 ~ 2896034 (+)
trnat-cgu_11 NA coding downstream 5227 2897069 ~ 2897141 (+)
G225377 NA non-coding upstream 111246 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 133363 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 253763 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 255669 2580720 ~ 2636101 (+)
G225419 NA non-coding downstream 43048 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 47546 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 61565 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 71547 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 156306 3048148 ~ 3051632 (+)
G225394 NA other upstream 41174 2850153 ~ 2850596 (+)
G225344 NA other upstream 128184 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 228636 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 397272 2479638 ~ 2494498 (+)
G224728 NA other upstream 594768 2163643 ~ 2297002 (+)
G225445 NA other downstream 238102 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 284698 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 461006 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 528521 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 618238 3510080 ~ 3510152 (+)

Expression


Co-expression Network