trnat-ugu_18


Basic Information

Item Value
gene id trnat-ugu_18
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2903828 ~ 2903900 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1448
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAATTCAATTCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1448 True 73 tRNA 0.53 1 2903828 2903900

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_17 NA coding upstream 1338 2902418 ~ 2902490 (+)
trnat-ugu_16 NA coding upstream 2619 2901137 ~ 2901209 (+)
trnat-cgu_12 NA coding upstream 3545 2900211 ~ 2900283 (+)
trnai-uau_29 NA coding upstream 4956 2898800 ~ 2898872 (+)
trnat-cgu_11 NA coding upstream 6687 2897069 ~ 2897141 (+)
trnat-ugu_19 NA coding downstream 601 2904501 ~ 2904573 (+)
trnai-uau_30 NA coding downstream 3436 2907336 ~ 2907408 (+)
trnai-uau_31 NA coding downstream 4744 2908644 ~ 2908716 (+)
trnat-ugu_20 NA coding downstream 8124 2912024 ~ 2912096 (+)
trnat-ugu_21 NA coding downstream 9372 2913272 ~ 2913344 (+)
G225377 NA non-coding upstream 123304 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 145421 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 265821 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 267727 2580720 ~ 2636101 (+)
G225419 NA non-coding downstream 30990 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 35488 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 49507 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 59489 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 144248 3048148 ~ 3051632 (+)
G225394 NA other upstream 53232 2850153 ~ 2850596 (+)
G225344 NA other upstream 140242 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 240694 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 409330 2479638 ~ 2494498 (+)
G224728 NA other upstream 606826 2163643 ~ 2297002 (+)
G225445 NA other downstream 226044 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 272640 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 448948 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 516463 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 606180 3510080 ~ 3510152 (+)

Expression


Co-expression Network