trnat-ugu_20


Basic Information

Item Value
gene id trnat-ugu_20
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2912024 ~ 2912096 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1452
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTAGTGTGTTCAATTCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1452 True 73 tRNA 0.53 1 2912024 2912096

Neighbor

gene id symbol gene type direction distance location
trnai-uau_31 NA coding upstream 3308 2908644 ~ 2908716 (+)
trnai-uau_30 NA coding upstream 4616 2907336 ~ 2907408 (+)
trnat-ugu_19 NA coding upstream 7451 2904501 ~ 2904573 (+)
trnat-ugu_18 NA coding upstream 8124 2903828 ~ 2903900 (+)
trnat-ugu_17 NA coding upstream 9534 2902418 ~ 2902490 (+)
trnat-ugu_21 NA coding downstream 1176 2913272 ~ 2913344 (+)
trnat-ugu_22 NA coding downstream 1849 2913945 ~ 2914017 (+)
trnat-ugu_23 NA coding downstream 2490 2914586 ~ 2914658 (+)
trnat-ugu_24 NA coding downstream 3516 2915612 ~ 2915684 (+)
trnat-ugu_25 NA coding downstream 4713 2916809 ~ 2916881 (+)
G225377 NA non-coding upstream 131500 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 153617 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 274017 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 275923 2580720 ~ 2636101 (+)
G225419 NA non-coding downstream 22794 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 27292 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 41311 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 51293 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 136052 3048148 ~ 3051632 (+)
G225394 NA other upstream 61428 2850153 ~ 2850596 (+)
G225344 NA other upstream 148438 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 248890 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 417526 2479638 ~ 2494498 (+)
G224728 NA other upstream 615022 2163643 ~ 2297002 (+)
G225445 NA other downstream 217848 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 264444 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 440752 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 508267 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 597984 3510080 ~ 3510152 (+)

Expression


Co-expression Network