trnat-ugu_27


Basic Information

Item Value
gene id trnat-ugu_27
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2919093 ~ 2919165 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1459
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAGTTCAATTCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1459 True 73 tRNA 0.55 1 2919093 2919165

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_26 NA coding upstream 1552 2917469 ~ 2917541 (+)
trnat-ugu_25 NA coding upstream 2212 2916809 ~ 2916881 (+)
trnat-ugu_24 NA coding upstream 3409 2915612 ~ 2915684 (+)
trnat-ugu_23 NA coding upstream 4435 2914586 ~ 2914658 (+)
trnat-ugu_22 NA coding upstream 5076 2913945 ~ 2914017 (+)
trnat-ugu_28 NA coding downstream 1628 2920793 ~ 2920865 (+)
trnat-ugu_29 NA coding downstream 2665 2921830 ~ 2921902 (+)
trnat-ugu_30 NA coding downstream 3329 2922494 ~ 2922566 (+)
trnat-ugu_31 NA coding downstream 4958 2924123 ~ 2924195 (+)
trnat-ugu_32 NA coding downstream 13492 2932657 ~ 2932729 (+)
G225377 NA non-coding upstream 138569 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 160686 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 281086 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 282992 2580720 ~ 2636101 (+)
G225419 NA non-coding downstream 15725 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 20223 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 34242 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 44224 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 128983 3048148 ~ 3051632 (+)
G225394 NA other upstream 68497 2850153 ~ 2850596 (+)
G225344 NA other upstream 155507 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 255959 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 424595 2479638 ~ 2494498 (+)
G224728 NA other upstream 622091 2163643 ~ 2297002 (+)
G225445 NA other downstream 210779 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 257375 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 433683 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 501198 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 590915 3510080 ~ 3510152 (+)

Expression


Co-expression Network