trnat-ugu_33


Basic Information

Item Value
gene id trnat-ugu_33
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3510080 ~ 3510152 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1465
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAGTTCAAATCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1465 True 73 tRNA 0.55 1 3510080 3510152

Neighbor

gene id symbol gene type direction distance location
cct2 cct2 coding upstream 162094 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 207330 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 392440 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 577351 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 585885 2924123 ~ 2924195 (+)
LOC120553119 LOC104957567 coding downstream 36587 3546739 ~ 3567593 (+)
cand1 cand1 coding downstream 226330 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 331844 3841996 ~ 3873319 (+)
il22 NA coding downstream 372021 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 488582 3998734 ~ 4019042 (+)
G225549 NA non-coding upstream 89123 3420483 ~ 3420957 (+)
G225550 NA non-coding upstream 147151 3353454 ~ 3362929 (+)
G225542 NA non-coding upstream 157270 3352531 ~ 3352810 (+)
G225489 NA non-coding upstream 202036 3307014 ~ 3308044 (+)
G225485 NA non-coding upstream 222743 3274728 ~ 3287337 (+)
G225570 NA non-coding downstream 59370 3569522 ~ 3627258 (+)
G225571 lsm8,LOC106596712,LOC106589648 non-coding downstream 60616 3570768 ~ 3574316 (+)
G225575 NA non-coding downstream 64898 3575050 ~ 3576021 (+)
G225566 NA non-coding downstream 67467 3577619 ~ 3616179 (+)
G225580 NA non-coding downstream 96677 3606829 ~ 3713336 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other upstream 3613 3420363 ~ 3506467 (+)
nots LOC104935800 other upstream 132745 3352848 ~ 3377335 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other upstream 263877 3176540 ~ 3246203 (+)
G225445 NA other upstream 378778 3129944 ~ 3131302 (+)
G225394 NA other upstream 659484 2850153 ~ 2850596 (+)
trnat-ugu_34 NA other downstream 7398 3517550 ~ 3517622 (+)
trnat-ugu_35 NA other downstream 8309 3518461 ~ 3518533 (+)
trnat-ugu_36 NA other downstream 11280 3521432 ~ 3521505 (+)
trnat-ugu_37 NA other downstream 18337 3528489 ~ 3528561 (+)
trnat-ugu_38 NA other downstream 21856 3532008 ~ 3532080 (+)

Expression


Co-expression Network