trnat-ugu_40


Basic Information

Item Value
gene id trnat-ugu_40
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3534600 ~ 3534672 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1472
GGCTCCATAGCTCAGGGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAGTTCAAATCTCTCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1472 True 73 tRNA 0.55 1 3534600 3534672

Neighbor

gene id symbol gene type direction distance location
cct2 cct2 coding upstream 186614 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 231850 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 416960 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 601871 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 610405 2924123 ~ 2924195 (+)
LOC120553119 LOC104957567 coding downstream 12067 3546739 ~ 3567593 (+)
cand1 cand1 coding downstream 201810 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 307324 3841996 ~ 3873319 (+)
il22 NA coding downstream 347501 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 464062 3998734 ~ 4019042 (+)
G225549 NA non-coding upstream 113643 3420483 ~ 3420957 (+)
G225550 NA non-coding upstream 171671 3353454 ~ 3362929 (+)
G225542 NA non-coding upstream 181790 3352531 ~ 3352810 (+)
G225489 NA non-coding upstream 226556 3307014 ~ 3308044 (+)
G225485 NA non-coding upstream 247263 3274728 ~ 3287337 (+)
G225570 NA non-coding downstream 34850 3569522 ~ 3627258 (+)
G225571 lsm8,LOC106596712,LOC106589648 non-coding downstream 36096 3570768 ~ 3574316 (+)
G225575 NA non-coding downstream 40378 3575050 ~ 3576021 (+)
G225566 NA non-coding downstream 42947 3577619 ~ 3616179 (+)
G225580 NA non-coding downstream 72157 3606829 ~ 3713336 (+)
trnat-ugu_39 NA other upstream 939 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 2520 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 6039 3528489 ~ 3528561 (+)
trnat-ugu_36 NA other upstream 13095 3521432 ~ 3521505 (+)
trnat-ugu_35 NA other upstream 16067 3518461 ~ 3518533 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other downstream 279809 3814481 ~ 3841174 (+)
LOC120553793 NA other downstream 401002 3935674 ~ 3938954 (+)
G225894 NA other downstream 1122772 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1746586 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 3125848 6660520 ~ 6686639 (+)

Expression


Co-expression Network