trnal-caa_18


Basic Information

Item Value
gene id trnal-caa_18
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4193802 ~ 4193912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1478
GTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTCCAATTGGaggcgtgggttcaaatcccactccTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1478 True 84 tRNA 0.57 2 4193802 4193912

Neighbor

gene id symbol gene type direction distance location
trnal-caa_17 NA coding upstream 3016 4190676 ~ 4190786 (+)
trnal-caa_16 NA coding upstream 3463 4190229 ~ 4190339 (+)
trnal-caa_15 NA coding upstream 5074 4188618 ~ 4188728 (+)
trnal-caa_14 NA coding upstream 5523 4188169 ~ 4188279 (+)
trnal-caa_13 NA coding upstream 7131 4186561 ~ 4186671 (+)
trnal-caa_19 NA coding downstream 2793 4196705 ~ 4196815 (+)
LOC120553538 LOC100693972,LOC102796305,LOC102207118,LOC102289868,LOC101481412 coding downstream 6760 4200672 ~ 4448037 (+)
slc35e3 slc35e3 coding downstream 289549 4483461 ~ 4492887 (+)
upf2 upf2 coding downstream 301978 4495890 ~ 4522614 (+)
LOC120553579 rab3ip coding downstream 349261 4543173 ~ 4563272 (+)
G225790 NA non-coding upstream 28781 4164429 ~ 4165021 (+)
G225785 NA non-coding upstream 53525 4138528 ~ 4140277 (+)
G225721 NA non-coding upstream 142679 3996965 ~ 4051123 (+)
G225725 NA non-coding upstream 152076 4041405 ~ 4041726 (+)
G225708 NA non-coding upstream 266837 3886624 ~ 3926965 (+)
G225804 NA non-coding downstream 18166 4212078 ~ 4212312 (+)
G225805 NA non-coding downstream 76881 4270793 ~ 4271236 (+)
G225807 NA non-coding downstream 115195 4309107 ~ 4309388 (+)
G225802 NA non-coding downstream 256148 4450060 ~ 4453432 (+)
G225842 NA non-coding downstream 279699 4473611 ~ 4475127 (+)
LOC120553793 NA other upstream 254848 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 352628 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 659130 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 660141 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 661722 3532008 ~ 3532080 (+)
G225894 NA other downstream 463532 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1087346 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2466608 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 3124605 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 3129158 7323070 ~ 7332259 (+)

Expression


Co-expression Network