trnaw-cca_35


Basic Information

Item Value
gene id trnaw-cca_35
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7147269 ~ 7147340 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1480
GGCTCTGTGGCGCAACGGTAGTGCGTCTGACTCCAGATTAGAAGGTTGCGTGTTCAAATCACGTCAGGGtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1480 True 72 tRNA 0.54 1 7147269 7147340

Neighbor

gene id symbol gene type direction distance location
lamb1b lamb1,LOC103364103 coding upstream 3264 7115962 ~ 7144005 (+)
dclre1c dclre1c,LOC106595997 coding upstream 47265 7089340 ~ 7100004 (+)
cd9b LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668 coding upstream 74266 7051855 ~ 7073003 (+)
LOC120553268 NA coding upstream 134989 6976407 ~ 7012280 (+)
LOC120553270 NA coding upstream 151681 6976332 ~ 6995588 (+)
vezt vezt coding downstream 93512 7240852 ~ 7255885 (+)
metap2a metap2,LOC104945620,LOC102784010,LOC102294382 coding downstream 109930 7257270 ~ 7267450 (+)
pah pah coding downstream 362624 7509964 ~ 7524419 (+)
LOC120553155 pah coding downstream 399088 7546428 ~ 7562205 (+)
LOC120553589 parpbp,LOC102779589 coding downstream 445539 7592879 ~ 7605838 (+)
LOC120553621 NA non-coding upstream 646209 6429094 ~ 6501060 (+)
LOC120553126 NA non-coding upstream 857370 6183044 ~ 6289899 (+)
G226097 NA non-coding upstream 1049361 6097678 ~ 6097908 (+)
G226085 NA non-coding upstream 1227855 5919094 ~ 5919414 (+)
G226042 NA non-coding upstream 1370836 5750128 ~ 5776433 (+)
G226292 eri1,LOC102785739 non-coding downstream 10150 7157490 ~ 7157887 (+)
G226306 ndufa12 non-coding downstream 66052 7213392 ~ 7216386 (+)
G226316 NA non-coding downstream 120169 7267509 ~ 7268758 (+)
G226317 NA non-coding downstream 121764 7269104 ~ 7270753 (+)
G226318 NA non-coding downstream 123977 7271317 ~ 7271707 (+)
prkcq prkcq,LOC102789446 other upstream 460630 6660520 ~ 6686639 (+)
abcc9 abcc9,LOC107387088 other upstream 1773632 5281258 ~ 5373637 (+)
G225894 NA other upstream 2489300 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 3208315 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 3306095 3814481 ~ 3841174 (+)
snrpf snrpf,LOC106576293 other downstream 171177 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 175730 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 215985 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 223102 7370442 ~ 7400399 (+)
ascl1a ascl1 other downstream 276278 7423618 ~ 7426254 (+)

Expression


Co-expression Network