trnay-gua_57


Basic Information

Item Value
gene id trnay-gua_57
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10192326 ~ 10192412 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1481
CcttcgatagctcagttggtagagcggaggACTGTAGATCCTTAGGTCGCTGGTTCAAATCCGGCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1481 True 73 tRNA 0.53 2 10192326 10192412

Neighbor

gene id symbol gene type direction distance location
LOC120553550 mcat,LOC102779964 coding upstream 9044 10175143 ~ 10183282 (+)
def6c LOC103371612 coding upstream 18212 10165497 ~ 10174114 (+)
LOC120553731 LOC105357099,LOC107105006,LOC108233212,LOC103459183 coding upstream 30672 10160731 ~ 10161654 (+)
foxm1 foxm1 coding upstream 44755 10140782 ~ 10147571 (+)
LOC120553300 NA coding upstream 75699 10108319 ~ 10116627 (+)
trnay-gua_58 NA coding downstream 2018 10194430 ~ 10194516 (+)
trnay-gua_59 NA coding downstream 2708 10195120 ~ 10195206 (+)
pacsin2 pacsin2 coding downstream 8362 10200774 ~ 10225902 (+)
arfgap3 arfgap3 coding downstream 34217 10226629 ~ 10234656 (+)
LOC120553694 ikbip coding downstream 42604 10235016 ~ 10241505 (+)
LOC120553125 NA non-coding upstream 255733 9934175 ~ 9936593 (+)
G226930 LOC104947167 non-coding upstream 324241 9867575 ~ 9868085 (+)
G226921 mtpn non-coding upstream 365801 9796473 ~ 9826525 (+)
G226922 NA non-coding upstream 385724 9806242 ~ 9806602 (+)
G226918 NA non-coding upstream 438210 9751944 ~ 9754116 (+)
G227088 NA non-coding downstream 345784 10538196 ~ 10538689 (+)
G227107 tcp11l2,LOC102777109 non-coding downstream 433034 10625446 ~ 10627982 (+)
G227108 NA non-coding downstream 436396 10628808 ~ 10630212 (+)
G227116 NA non-coding downstream 473297 10665709 ~ 10667280 (+)
G227139 NA non-coding downstream 513498 10705910 ~ 10709545 (+)
ndufb2 ndufb2,LOC102790702 other upstream 950977 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 1019106 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 1759629 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 2623023 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 2660249 7525892 ~ 7532077 (+)
G227121 kera other downstream 504842 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 539657 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 755873 10948285 ~ 10986201 (+)
G227216 NA other downstream 910424 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1496757 11689169 ~ 11757317 (+)

Expression


Co-expression Network