trnal-caa_21


Basic Information

Item Value
gene id trnal-caa_21
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 13801648 ~ 13801760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1489
GTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTCCGAATGGaggcgtgggttcaaatcccacttcTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1489 True 84 tRNA 0.57 2 13801648 13801760

Neighbor

gene id symbol gene type direction distance location
LOC120553479 NA coding upstream 133911 13660950 ~ 13667737 (+)
LOC120553484 ninj2,LOC103459309,LOC106521792 coding upstream 142414 13630951 ~ 13659234 (+)
napepld NA coding upstream 311229 13479727 ~ 13490419 (+)
cpsf6 cpsf6 coding upstream 327390 13444584 ~ 13474258 (+)
cacna2d4a cacna2d4,LOC102201998 coding upstream 358112 13358887 ~ 13443536 (+)
wnt5b LOC101487154,LOC102306408,LOC100690824,LOC102798286 coding downstream 433 13802193 ~ 13895001 (+)
trnal-caa_23 NA coding downstream 31279 13833039 ~ 13833149 (+)
trnal-caa_24 NA coding downstream 32461 13834221 ~ 13834331 (+)
trnak-cuu_14 NA coding downstream 33169 13834929 ~ 13835001 (+)
adipor2 adipor2 coding downstream 101098 13902858 ~ 13939279 (+)
G227662 NA non-coding upstream 246822 13554250 ~ 13554826 (+)
G227646 NA non-coding upstream 270101 13516482 ~ 13531547 (+)
G227639 NA non-coding upstream 307787 13493401 ~ 13493861 (+)
G227510 zc3hc1 non-coding upstream 726300 13071545 ~ 13075348 (+)
G227499 NA non-coding upstream 758630 12987713 ~ 13043018 (+)
G227734 NA non-coding downstream 154937 13956697 ~ 13965492 (+)
G227736 phtf2 non-coding downstream 165783 13967543 ~ 13969687 (+)
G227743 NA non-coding downstream 214338 14016098 ~ 14054224 (+)
G227742 rsbn1l non-coding downstream 230635 14032395 ~ 14046985 (+)
LOC120553487 NA non-coding downstream 313983 14115743 ~ 14116336 (+)
LOC120553473 LOC102193240,LOC101463811,LOC103146510,LOC103459282,LOC106521789,LOC108235098 other upstream 3268 13674804 ~ 13798380 (+)
trnak-cuu_12 NA other upstream 26589 13774987 ~ 13775059 (+)
trnal-caa_20 NA other upstream 31471 13770066 ~ 13770177 (+)
trnak-cuu_11 NA other upstream 32521 13769055 ~ 13769127 (+)
yeats4 yeats4 other upstream 322533 13474549 ~ 13479115 (+)
trnal-caa_22 NA other downstream 333 13802093 ~ 13802203 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other downstream 200372 14002132 ~ 14004905 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other downstream 652833 14454593 ~ 14462474 (+)
LOC120553256 gsap,LOC102790605 other downstream 1366844 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 1498762 15300522 ~ 15331178 (+)

Expression


Co-expression Network