trnal-cag_20



Basic Information


Item Value
gene id trnal-cag_20
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19447021 ~ 19447103 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1498
GTCAGGATGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCTCTGGAGgcgtgggttcgaatcccactTCTGACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1498 True 83 tRNA 0.61 1 19447021 19447103

Neighbor


gene id symbol gene type direction distance location
trnal-cag_19 NA coding downstream 3707 19443232 ~ 19443314 (-)
trnal-cag_18 NA coding downstream 8422 19438517 ~ 19438599 (-)
LOC120553005 NA coding downstream 18592 19418241 ~ 19428429 (-)
arl1 arl1 coding downstream 39663 19396856 ~ 19407358 (-)
slc5a8 slc5a8 coding downstream 84911 19355872 ~ 19362110 (-)
trnal-cag_21 NA coding upstream 961 19448064 ~ 19448146 (-)
trnal-cag_22 NA coding upstream 4885 19451988 ~ 19452073 (-)
trnal-cag_23 NA coding upstream 5366 19452469 ~ 19452550 (-)
trnal-cag_24 NA coding upstream 5843 19452946 ~ 19453028 (-)
rpap3 NA coding upstream 48316 19495419 ~ 19504306 (-)
G228855 NA non-coding downstream 32419 19414330 ~ 19414602 (-)
G228839 NA non-coding downstream 71226 19375459 ~ 19375795 (-)
G228838 NA non-coding downstream 71660 19374204 ~ 19375361 (-)
G228836 NA non-coding downstream 81493 19365124 ~ 19365528 (-)
G228835 NA non-coding downstream 82605 19364156 ~ 19364416 (-)
G228851 NA non-coding upstream 33718 19480821 ~ 19481084 (-)
G228869 LOC104924522 non-coding upstream 34121 19481224 ~ 19481477 (-)
G228870 NA non-coding upstream 35069 19482172 ~ 19482617 (-)
G228871 NA non-coding upstream 35764 19482867 ~ 19483153 (-)
G228880 NA non-coding upstream 52135 19499238 ~ 19499610 (-)
sox5 sox5 other downstream 176685 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 623931 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 1025614 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 1346026 17830616 ~ 18100995 (-)
G228465 NA other downstream 2144823 17295122 ~ 17302198 (-)
G228934 fam19a2,LOC103364248 other upstream 285999 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 359711 19806814 ~ 19839350 (-)
rerg rerg other upstream 619792 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 853989 20301092 ~ 20354627 (-)
G229199 NA other upstream 1510554 20957657 ~ 20958220 (-)

Expression



Co-expression Network