trnal-caa_26


Basic Information

Item Value
gene id trnal-caa_26
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21579904 ~ 21580014 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1505
GTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTCCAAATGGaggcgtgggttcaaatccTACTCCTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1505 True 84 tRNA 0.56 2 21579904 21580014

Neighbor

gene id symbol gene type direction distance location
trnal-caa_25 NA coding upstream 481 21579313 ~ 21579423 (+)
scaf11 NA coding upstream 127378 21433581 ~ 21452526 (+)
tm7sf3 tm7sf3,LOC108229002 coding upstream 253622 21305614 ~ 21326282 (+)
fgfr1op2 fgfr1op2 coding upstream 274982 21301420 ~ 21304922 (+)
zgc:162331 LOC104922672,LOC101475914,LOC102301200,LOC102199861,LOC102799838,LOC101071909,LOC104956107,LOC100698522 coding upstream 360678 21183886 ~ 21219226 (+)
trnal-caa_27 NA coding downstream 238 21580252 ~ 21580362 (+)
trnal-caa_28 NA coding downstream 483 21580497 ~ 21580607 (+)
trnal-caa_29 NA coding downstream 728 21580742 ~ 21580852 (+)
trnal-caa_30 NA coding downstream 1076 21581090 ~ 21581200 (+)
trnal-caa_31 NA coding downstream 1965 21581979 ~ 21582089 (+)
G229264 NA non-coding upstream 308793 21265412 ~ 21271111 (+)
G229263 NA non-coding upstream 315205 21264396 ~ 21264699 (+)
G229233 NA non-coding upstream 359092 21220448 ~ 21220812 (+)
G229205 NA non-coding upstream 517469 21037948 ~ 21062435 (+)
G229182 NA non-coding upstream 654845 20923948 ~ 20925059 (+)
G229381 NA non-coding downstream 39959 21619973 ~ 21620222 (+)
G229386 NA non-coding downstream 57083 21637097 ~ 21637359 (+)
G229395 NA non-coding downstream 86184 21666198 ~ 21666434 (+)
G229396 NA non-coding downstream 87699 21667713 ~ 21667988 (+)
G229399 NA non-coding downstream 102605 21682619 ~ 21683484 (+)
arid2 arid2 other upstream 150666 21376872 ~ 21429238 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other upstream 429553 21148267 ~ 21150351 (+)
ucmaa NA other upstream 1188498 20382393 ~ 20391406 (+)
LOC120553418 NA other upstream 1354719 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 1406497 20147078 ~ 20173407 (+)
G229423 NA other downstream 257908 21837922 ~ 21847020 (+)
G229425 NA other downstream 269197 21849211 ~ 21850601 (+)
G229422 NA other downstream 277969 21857983 ~ 21859209 (+)
G229428 NA other downstream 287187 21867201 ~ 21868297 (+)
phlda1 phlda1 other downstream 1159703 22739717 ~ 22743179 (+)

Expression


Co-expression Network