G231503


Basic Information

Item Value
gene id G231503
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2042466 ~ 2110774 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314002
tgcaaaTAACTGTTTCCTGTATGAGTAATGCATCTGTTAAATATTGAGttcaaaataaacaataacCAGGGCTCAACGTTAGTGTGTTTcagacaaaattaaataaaaaaaaaaacaatgctcaCAATAAATCTTGACAATATTTACAACAGTTAGTTTTTTTCAATACATTCTGTTGgcatttcaaaacaaaaagaTAATTTGTTGAAACATGGAGTGTGTTTTCCAAAAACATAATTCCCTCAAAGTTTCCAGTTTTTACAAACTGTTAGCAGCTGGGAGCTCCGACCAATCCAGGTGATTTTCCACGACAACAAATACCACGACACAGGAAATGACGGAGGGAATAAAAACACTTAACGTGCATTCGATGAGTAGGACGCAAACATTTTTGGTTTTTTGTGCAACCTTGATTTTCTTAAGTTTTCCAGACCTGCGTGGAAACATGTCCTTAGTTATTTTCCTTCATTTCTGATCCTTCTGCAGCTGCCTGCCTGACTGTAGCGGCCTCCTTAGTGAAGGTTTCAGTATTACTGGGTCAGTTCATGTAATGAGAGCTTATAGTACCATTTTTTACTTAGCTTAAACATGTTAAACGGGTAACAGATACCTTATGTTTTGTAACTTCTTCTTGCAATCTTTCTAAAACCTTGTGCTGCCTCATATGAAACATGGTGAAATCTGTCAGGTCAATCCTGTTGTACTGTATCGCACTGTCCAAAGACAATTTTCATCTAGACATCTAGATAACAAAGACAGCCAAAACAAAAGGATGAAAAGCACCAGCACACTGCTAATATTGTTATGCACCTGCAAAAAGTTCTGGATGTGCATGTCCCTCCCTATTGATGACAGCCTGCATCCAAATTATTACAGGGTCACACATTTAGAACCAAATTTATAGTTTTTCTTCCCATTTTTGACAAACTAAAGAAAACTACAAGATCTTAGCAAACTAGAGCTGAGCTGGAGCTGATTTTTGTTCATGGTCAACAAATGGACTGAAAACACTTCCAGCTGATTTGAGATACTTCACGTGTTGTACTTTGATTATGAGAAAACAACTATAAATAAGGATGCACTGATCCGACTTACTCTCTCTCATAATGTCAAACTCTGATTACCGATCTATTCACCGGATTAAAAATCCGTTCATTAGTGTCATTTTAACTTAAGTCAGAGATGGTGTGGCGGTCTGCCACTACTAAATTAATCTAACTAACAGAAGAAACACTTACATAAAAGATATATAACGTAACAAAGAAACGGACAAACAGACTTGTCACATCTGGCCGACACCGACAATGATTAGCAGCCACCTTAACAAATCAATGGATTATAAATTAAATAGAGGAATCTCGCACAGTTTGACGTGCTATGAACTTGTAAGTTCGCCATTTATCGCACTCATTTTAAGGCTCTTTTGAACCAACCTTTGACACAATTAAATTAACATTAAGATATACCAAAAAGCCAACTTAACTGATACTTAACTGCTCCAGTTAGTGTCAGTTTGTGCCTTCAGGTCAAAGTAAAAGAAACAAGTTAATTGGTGCATCTGATGTGTAAATATGAACATGAATACAGGcagcattaatataaatatgGCAGCaacacataacaaaacaaaacggtTAACTTAAACCCAAAGTGCAGCAGTCACAAACTCTccacctttaaataaaatcagTGTTAGACATTTTATAAGATACTATCAGGGTTCAGTGGTCTCACAACTGgtcccttttctcttttttttttacatcatatATGATGCAGAGTAACATTTTATCACAAGAAAAACCCACACCCAGATTTCACGATTCAAACTAAATTCTGTACTTTTTACAGATTTTTATCTTCAGATGATTTTTCTAAGgccaatattaatattaatcatTGTCCCGTGCACTTTTACAGAATATAATATCATTCAAAAAAGGTGTGCTTCAATTAGAGTTTGTGAACTTGTTTAAGTTTGTACCAGGaaatggcagagagagagacagagagagagagagacagagagagggagagagacagagagagggacagaaagaggtagagacagagagagagagagagagaaagaggagagagatagagagaggagagaagagagagagagagagagagagagggggagagagagagagagggagagagagaacttcTGACCAATCACTTGTTCTTGGAGTTGCTACAACCACAGCAACTGAAAGAATTAATCAATTCCTTAATTGGCTGATTGATGGGCAACAAGTTTAAGAATTGATTAATcacttaaagggacagttgagatgttttgaagtgtggttgtatgagctgcttctccatagtcagtgtataaGCTCCAGTAGATGGTACTCAAATGTGAGGATCTTCAAATACACCCTTTTTGAATGAGATGATATTTCATACATACAGTTTTTTCAGACTTCATGATCATCATTGTAAGATTACATAAGATTATGAGTATCAAATTAATTTTCCACTACGTGCCAGACCTTTCAGGTCTGTGCAGCAACCCTGTGAACACATCCTTACACTTGACCACAACTTTGTTTCCAAGTTGCAAATACTTCTTTCCGTCGCAGTTTTCCCTTCAGCCTGGCTTTCTAAACGTTTTACTTGAACTTGAAGCAGTACAGTTAAATGCCTCACTCCCACACgtcattgattaattgattaaatgAATGACCGTGGGAGTGTTGATCTTGACACTGTTGACACTGAAGACCCAGAGTTTGGCACTCTGAACATTAAACATGCTAAACGTGTGTGACAGTACCTGTGTTTCCAGATTatataagaagaagaaaaagatcaGCTCTTCTCTTTTTTCAGTCTGCAAACAATAGATCTTCTTAGCGGTTGAAATTGTTAAGCGGAAGTAAAAGCTTTCTGCCTCTGGCTAAATATTCCAGCGCAGTTACATTGAAAACACGTGGAGCAGCGATGATGTGGTTACTACGGTTAGGACTTGCCTGTCATGAGGTGGGAGGAATTCTTCACAGGTTGCAGTTACAGTAGTGTCGCACTGGTTTCACCTATTTACAACGTCAGCGGAGTaaagctcctctctctctcttttgctaaTTGAACATGATGGACTCTGGATCCTGGTTCATCATTTGAGCCATGTGCCGCAGGACGTCCTTCTTGGTGATGA
>TU314003
GACAGAGAGAGagagagagagagagggggagagagagagagagggagagagagggagagataaagatagagggagagagagggaaggagagagagagagagagagagagagaacttcTGACCAATCACTTGTTCTTGGAGTTGCTACAACCACAGCAACTGAAAGAATTAATCAATTCCTTAATTGGCTGATTGATGGGCAACAAGTTTAAGAATTGATTAATcacttaaagggacagttgagatgttttgaagtgtggttgtatgagctgcttctccatagtcagtgtataaGCTCCAGTAGATGGTACTCAAATGTGAGGATCTTCAAATACACCCTTTTTGAATGAGATGATATTTCATACATACAGTTTTTTCAGACTTCATGATCATCATTGTAAGATTACATAAGATTATGAGTATCAAATTAATTTTCCACTACGTGCCAGACCTTTCAGGTCTGTGCAGCAACCCTGTGAACACATCCTTACACTTGACCACAACTTTGTTTCCAAGTTGCAAATACTTCTTTCCGTCGCAGTTTTCCCTTCAGCCTGGCTTTCTAAACGTTTTACTTGAACTTGAAGCAGTACAGTTAAATGCCTCACTCCCACACgtcattgattaattgattaaatgAATGACCGTGGGAGTGTTGATCTTGACACTGTTGACACTGAAGACCCAGAGTTTGGCACTCTGAACATTAAACATGCTAAACGTGTGTGACAGTACCTGTGTTTCCAGATTatataagaagaagaaaaagatcaGCTCTTCTCTTTTTTCAGTCTGCAAACAATAGATCTTCTTAGCGGTTGAAATTGTTAAGCGGAAGTAAAAGCTTTCTGCCTCTGGCTAAATATTCCAGCGCAGTTACATTGAAAACACGTGGAGCAGCGATGATGTGGTTACTACGGTTAGGACTTGCCTGTCATGAGGTGGGAGGAATTCTTCACAGGTTGCAGTTACAGTAGTGTCGCACTGGTTTCACCTATTTACAACGTCAGCGGAGTaaagctcctctctctctcttttgctaaTTGAACATGATGGACTCTGGATCCTGGTTCATCATTTGAGCCATGTGCCGCAGGACGTCCTTCTTGGTGATGA
>TU314004
tgcaaaTAACTGTTTCCTGTATGAGTAATGCATCTGTTAAATATTGAGttcaaaataaacaataacCAGGGCTCAACGTTAGTGTGTTTcagacaaaattaaataaaaaaaaaaacaatgctcaCAATAAATCTTGACAATATTTACAACAGTTAGTTTTTTTCAATACATTCTGTTGgcatttcaaaacaaaaagaTAATTTGTTGAAACATGGAGTGTGTTTTCCAAAAACATAATTCCCTCAAAGTTTCCAGTTTTTACAAACTGTTAGCAGCTGGGAGCTCCGACCAATCCAGGTGATTTTCCACGACAACAAATACCACGACACAGGAAATGACGGAGGGAATAAAAACACTTAACGTGCATTCGATGAGTAGGACGCAAACATTTTTGGTTTTTTGTGCAACCTTGATTTTCTTAAGTTTTCCAGACCTGCGTGGAAACATGTCCTTAGTTATTTTCCTTCATTTCTGATCCTTCTGCAGCTGCCTGCCTGACTGTAGCGGCCTCCTTAGTGAAGGTTTCAGTATTACTGGGTCAGTTCATGTAATGAGAGCTTATAGTACCATTTTTTACTTAGCTTAAACATGTTAAACGGGTAACAGATACCTTATGTTTTGTAACTTCTTCTTGCAATCTTTCTAAAACCTTGTGCTGCCTCATATGAAACATGGTGAAATCTGTCAGGTCAATCCTGTTGTACTGTATCGCACTGTCCAAAGACAATTTTCATCTAGACATCTAGATAACAAAGACAGCCAAAACAAAAGGATGAAAAGCACCAGCACACTGCTAATATTGTTATGCACCTGCAAAAAGTTCTGGATGTGCATGTCCCTCCCTATTGATGACAGCCTGCATCCAAATTATTACAGGGTCACACATTTAGAACCAAATTTATAGTTTTTCTTCCCATTTTTGACAAACTAAAGAAAACTACAAGATCTTAGCAAACTAGAGCTGAGCTGGAGCTGATTTTTGTTCATGGTCAACAAATGGACTGAAAACACTTCCAGCTGATTTGAGATACTTCACGTGTTGTACTTTGATTATGAGAAAACAACTATAAATAAGGATGCACTGATCCGACTTACTCTCTCTCATAATGTCAAACTCTGATTACCGATCTATTCACCGGATTAAAAATCCGTTCATTAGTGTCATTTTAACTTAAGTCAGAGATGGTGTGGCGGTCTGCCACTACTAAATTAATCTAACTAACAGAAGAAACACTTACATAAAAGATATATAACGTAACAAAGAAACGGACAAACAGACTTGTCACATCTGGCCGACACCGACAATGATTAGCAGCCACCTTAACAAATCAATGGATTATAAATTAAATAGAGGAATCTCGCACAGTTTGACGTGCTATGAACTTGTAAGTTCGCCATTTATCGCACTCATTTTAAGGCTCTTTTGAACCAACCTTTGACACAATTAAATTAACATTAAGATATACCAAAAAGCCAACTTAACTGATACTTAACTGCTCCAGTTAGTGTCAGTTTGTGCCTTCAGGTCAAAGTAAAAGAAACAAGTTAATTGGTGCATCTGATGTGTAAATATGAACATGAATACAGGcagcattaatataaatatgGCAGCaacacataacaaaacaaaacggtTAACTTAAACCCAAAGTGCAGCAGTCACAAACTCTccacctttaaataaaatcagTGTTAGACATTTTATAAGATACTATCAGGGTTCAGTGGTCTCACAACTGgtcccttttctcttttttttttacatcatatATGATGCAGAGTAACATTTTATCACAAGAAAAACCCACACCCAGATTTCACGATTCAAACTAAATTCTGTACTTTTTACAGATTTTTATCTTCAGATGATTTTTCTAAGgccaatattaatattaatcatTGTCCCGTGCACTTTTACAGAATATAATATCATTCAAAAAAGGTGTGCTTCAATTAGAGTTTGTGAACTTGTTTAAGTTTGTACCAGGaaatggcagagagagagacagagagagagagagacagagagagggagagagacagagagagggacagaaagagagggggagagagagagagagggagagagagggagagataaagatagagggagagagagggaaggagagagagagagagagagagagagaacttcTGACCAATCACTTGTTCTTGGAGTTGCTACAACCACAGCAACTGAAAGAATTAATCAATTCCTTAATTGGCTGATTGATGGGCAACAAGTTTAAGAATTGATTAATcacttaaagggacagttgagatgttttgaagtgtggttgtatgagctgcttctccatagtcagtgtataaGCTCCAGTAGATGGTACTCAAATGTGAGGATCTTCAAATACACCCTTTTTGAATGAGATGATATTTCATACATACAGTTTTTTCAGACTTCATGATCATCATTGTAAGATTACATAAGATTATGAGTATCAAATTAATTTTCCACTACGTGCCAGACCTTTCAGGTCTGTGCAGCAACCCTGTGAACACATCCTTACACTTGACCACAACTTTGTTTCCAAGTTGCAAATACTTCTTTCCGTCGCAGTTTTCCCTTCAGCCTGGCTTTCTAAACGTTTTACTTGAACTTGAAGCAGTACAGTTAAATGCCTCACTCCCACACgtcattgattaattgattaaatgAATGACCGTGGGAGTGTTGATCTTGACACTGTTGACACTGAAGACCCAGAGTTTGGCACTCTGAACATTAAACATGCTAAACGTGTGTGACAGTACCTGTGTTTCCAGATTatataagaagaagaaaaagatcaGCTCTTCTCTTTTTTCAGTCTGCAAACAATAGATCTTCTTAGCGGTTGAAATTGTTAAGCGGAAGTAAAAGCTTTCTGCCTCTGGCTAAATATTCCAGCGCAGTTACATTGAAAACACGTGGAGCAGCGATGATGTGGTTACTACGGTTAGGACTTGCCTGTCATGAGGTGGGAGGAATTCTTCACAGGTTGCAGTTACAGTAGTGTCGCACTGGTTTCACCTATTTACAACGTCAGCGGAGTaaagctcctctctctctcttttgctaaTTGAACATGATGGACTCTGGATCCTGGTTCATCATTTGAGCCATGTGCCGCAGGACGTCCTTCTTGGTGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314002 True 3172 lncRNA 0.38 3 2107353 2110774
TU314003 False 1115 lncRNA 0.42 2 2042466 2110774
TU314004 False 3153 lncRNA 0.38 3 2107353 2110774

Neighbor

gene id symbol gene type direction distance location
LOC120554025 NA coding upstream 10711 1964757 ~ 2031755 (+)
LOC120554615 inhbb,LOC104931304,LOC101477046 coding upstream 203225 1828526 ~ 1839241 (+)
LOC120554028 NA coding upstream 231764 1809145 ~ 1810702 (+)
mlpha LOC107384560 coding upstream 261039 1749278 ~ 1781427 (+)
LOC120554628 NA coding upstream 299074 1733581 ~ 1743392 (+)
LOC120554727 gp91phox,LOC107384631,LOC103389690,LOC100705711,LOC103372494 coding downstream 134937 2245711 ~ 2258027 (+)
bin1b bin1,LOC100703344,LOC102312482,LOC101065659,LOC103154120,LOC105916432,LOC107384639,LOC102793948,LOC103389239,LOC108251630 coding downstream 217737 2328511 ~ 2349442 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding downstream 239770 2350544 ~ 2352359 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding downstream 242874 2353648 ~ 2356348 (+)
desmb des,LOC103366968,LOC101472777 coding downstream 297121 2407895 ~ 2417552 (+)
G231495 NA non-coding upstream 130403 1856072 ~ 1912063 (+)
G231494 NA non-coding upstream 190620 1851176 ~ 1851846 (+)
G231474 NA non-coding upstream 266306 1664876 ~ 1776160 (+)
G231555 NA non-coding downstream 85266 2196040 ~ 2196378 (+)
G231564 NA non-coding downstream 103879 2214653 ~ 2216612 (+)
G231573 NA non-coding downstream 159279 2270053 ~ 2286959 (+)
G231574 NA non-coding downstream 170445 2281219 ~ 2282893 (+)
G231910 NA non-coding downstream 252119 2362893 ~ 2406781 (+)
G231461 LOC107384560,LOC103366582 other upstream 250608 1716411 ~ 1791858 (+)
G231423 agap1,LOC101478076,LOC102798364,LOC103389825 other upstream 329064 1399732 ~ 1713402 (+)
LOC120554068 agap1,LOC101478076 other upstream 521402 1468168 ~ 1521064 (+)
G231428 NA other upstream 545859 1487274 ~ 1496607 (+)
LOC120554625 NA other upstream 639412 1270784 ~ 1403054 (+)
sumo1 sumo1 other downstream 378361 2489135 ~ 2494174 (+)
G232031 NA other downstream 789039 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 1442804 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 2229720 4340494 ~ 4399319 (+)
G232425 NA other downstream 2306390 4417164 ~ 4418102 (+)

Expression


Co-expression Network