G231514 (LOC101480717,LOC102290810,LOC102794459)


Basic Information

Item Value
gene id G231514
gene name LOC101480717,LOC102290810,LOC102794459
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2096875 ~ 2098749 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314015
AGACAACAAGATGAAAAACAGGATCATTGACATTTTACAAGACTCagataaatatacaaataaatccATTAACAGGAAAGCcagaatgctaaaaaaaaatatctgatgAAGCCagatgagaggaaaaaaacTGCATACATCAGGGTTTGATTCCTCCTGACTGTATATATTAGCATGGGAACGCTACATTAAAGAGCATATAAAGTGAGATCATCCAGCCTGACGACACGTAGCTGCTAAACTGCAGCAGCTCTACTTTACTGTGAGCTGAGATGTATTGATTAATCAGCAGCCTCATATCCGCATAAATTACACACAAACGTTCATGGATGGCATGCAAATTGTGCATCATGGTTACAGAAGTGAGGGGATCCTGCAGTACACAGGCAGGTATAGGTTAGTCTCTCAGCTACCCTGCCAACAGTGAGGGAAAAAAACGGCCTCTCTGTGAATGAAGCGCTCCCTGAGGACAGTTTGTCCCCGACACCTGAAGGAATCAGTATCAACTGGTTTGCTTTAAGACCCTCCTGCAGTGAATCCTATCATCCTGACTGGTGGGTTGACAGCTACTGTAGCCCTCCACACCCTTGAAGTTGCTGGAGTTAACCCAGGAGCTGGCCACTGTGTCCACCATCCTGTCCAGCACGGTCTGGTCCTGCTCCATGTCGGGGGACTTCTCCTCGTCCAGGATGAGCTCCATGATCTCCTGGCCCACCTGGAGCCTCTTCCCCAGGTCCTTCTGCATCAcctgctccagcaaaaactccatgctcacctcctcctccatggcTGCTGCCTGGGACAGAAAATTCAAGGCACGAGCAGACTTCCAGCGAGCCTTTTCTCCTCACGTTTTGTTCACCAAAGTCTTTACAGTTTCCAGGACCTGCTGCAGGATACTTGGCCCCGTTTATACGCCAATAATTCTCTTTAAGAGCATGCTAACGTTGGTGAATGAGCACCATAACATCCTGCAGTGGAGGGCTGCTTTTGATATTGCACTTCATTCTCCT

Function

NR:

description
CLIP-associating protein 1-A isoform X18

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314015 True 1013 TUCP 0.47 2 2096875 2098749

Neighbor

gene id symbol gene type direction distance location
LOC120554798 NA coding upstream 1476 2095271 ~ 2095399 (+)
LOC120554025 NA coding upstream 65120 1964757 ~ 2031755 (+)
LOC120554615 inhbb,LOC104931304,LOC101477046 coding upstream 257634 1828526 ~ 1839241 (+)
LOC120554028 NA coding upstream 286173 1809145 ~ 1810702 (+)
mlpha LOC107384560 coding upstream 315448 1749278 ~ 1781427 (+)
LOC120554020 LOC103368590 coding downstream 1403 2100152 ~ 2107127 (+)
LOC120554727 gp91phox,LOC107384631,LOC103389690,LOC100705711,LOC103372494 coding downstream 146962 2245711 ~ 2258027 (+)
bin1b bin1,LOC100703344,LOC102312482,LOC101065659,LOC103154120,LOC105916432,LOC107384639,LOC102793948,LOC103389239,LOC108251630 coding downstream 229762 2328511 ~ 2349442 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding downstream 251795 2350544 ~ 2352359 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding downstream 254899 2353648 ~ 2356348 (+)
G231512 NA non-coding upstream 26033 2069157 ~ 2070842 (+)
G231495 NA non-coding upstream 184812 1856072 ~ 1912063 (+)
G231494 NA non-coding upstream 245029 1851176 ~ 1851846 (+)
G231474 NA non-coding upstream 320715 1664876 ~ 1776160 (+)
G231463 NA non-coding upstream 324636 1716700 ~ 1772239 (+)
G231555 NA non-coding downstream 97291 2196040 ~ 2196378 (+)
G231564 NA non-coding downstream 115904 2214653 ~ 2216612 (+)
G231573 NA non-coding downstream 171304 2270053 ~ 2286959 (+)
G231574 NA non-coding downstream 182470 2281219 ~ 2282893 (+)
G231910 NA non-coding downstream 264144 2362893 ~ 2406781 (+)
G231461 LOC107384560,LOC103366582 other upstream 305017 1716411 ~ 1791858 (+)
G231423 agap1,LOC101478076,LOC102798364,LOC103389825 other upstream 383473 1399732 ~ 1713402 (+)
LOC120554068 agap1,LOC101478076 other upstream 575811 1468168 ~ 1521064 (+)
G231428 NA other upstream 600268 1487274 ~ 1496607 (+)
G231361 NA other upstream 646699 1235697 ~ 1450176 (+)
sumo1 sumo1 other downstream 390386 2489135 ~ 2494174 (+)
G232031 NA other downstream 801064 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 1454829 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 2241745 4340494 ~ 4399319 (+)
G232425 NA other downstream 2318415 4417164 ~ 4418102 (+)

Expression


Co-expression Network