G231574


Basic Information

Item Value
gene id G231574
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2281219 ~ 2282893 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314083
CTACACAGACTGAATCATGATTGGCTCATTTCAGATTGAGGTACCGCGGCAACACGTCGTCCCAAAACTCCTCAGACTCGTCCGCtgcctgacctttgaccccggACCTCCCTTTCCTGCCAGACACAACTCTCTGGACAACAGCTGACTCTGGCTTTTTCAcaacctcttcctcctcttcttcttcttcttcttcttcttcaccctccTCTTCTTTGTTATcaacctctccctcctcctcctcttcttcttctccctcctccccctcttcttcttctccctcctcctcctcttcactctctttttcctcaacactctcttcctctgcttctccttcctcttcttccccctcctcctcctcttcactctctttttcctcaacactctcttcctctgcttctccttcctcttcttcctcctcttcttcttcttcttcctcctgcttttcattttcactcccctcctcttctccttcttcctcctgtTCACTTTCCTCCTTTTCGCTCTCTTCTTCCTCActactctcctcctcttcctcctctgctcctTCCTCCTCTGCTTCACTTTCACCCTTTTCACTTTCTTCTTCCGCACTACTCTCCTCCCctgcttcctcttcttcctcctcttctccttcttcctcctcatcttcaCTTTCCTCCTTTTTGCTCTTTTCTTCCTCActactctcctcctcttcctcctcagcaccactactttcttcctcctcttctcctccctctctctcgctctctgactcactcttttctgtctcttcctcACTCTTTAAGGACTCACTTTCACCCTCCTCTTCCACAtccccctcttcttcttcctcaccttcctccttctcttcagactctcctctgctctctgtctcgtGACTCCACTCTTCCTCTACCTcgctttcctcctcctcctcttctgcaTCGCCTCCTCTGCTCGCTTTTGATTCTGTCTCGACTGCACTTTCACTTCCTGTCGTCCCACtcgcttcctcttcctcctcctcttcctcggcACTTCTCTCCTCTTCGACATCTGTTTCCAACTCATCCTCTGGTTGCAGAGTGTCGCTGtcttcgtcttcttcttcttctgttactTTCTCGATACTGCGACtgacatcctcctcttcctcctcgctGACTCCTGCGCTCGTTCTCTGCCCTtcctcatcttcatcctcctcttcctcctcactgACTCCAGTGCTCGTTCTCTGCCCTTCCTCATCTTCATCCGCTTCTTCCTGTCTGACCATTGCAGAGTCCTTACTCTCCTCCTCACTTATATCCTGACTCGTTCCCTCCTCTCCCTGACTCGTTCCCTCCTCTCCCTGACtcgtttcctcctctctctgactcgtttcctcctctctctgactCGTTCCCTTCTTTCTCTGACTCGTTTCCTTCTTGCCCTGACTCGTCCCACCCTCAGGACTCTCCGGTATGATGTTGATGCTGACAGCTGATTTGTTGCTGAAATCGTCGGTGTAGGATTCAGACTCCTGGCTCCGTGATTGGGCCGTGCCGTCTTTCAGGACGCCGCGGCTGCTCTCGGATGGGGATGGCGACGGCGAGCTTAAACAGCTTCTGGACGCCACCTCATGCATTACCACCGCCCCCGC

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU314083 True 1633 lncRNA 0.52 3 2281219 2282893

Neighbor

gene id symbol gene type direction distance location
LOC120554727 gp91phox,LOC107384631,LOC103389690,LOC100705711,LOC103372494 coding upstream 23192 2245711 ~ 2258027 (+)
LOC120554020 LOC103368590 coding upstream 174092 2100152 ~ 2107127 (+)
LOC120554798 NA coding upstream 185820 2095271 ~ 2095399 (+)
LOC120554025 NA coding upstream 249464 1964757 ~ 2031755 (+)
LOC120554615 inhbb,LOC104931304,LOC101477046 coding upstream 441978 1828526 ~ 1839241 (+)
bin1b bin1,LOC100703344,LOC102312482,LOC101065659,LOC103154120,LOC105916432,LOC107384639,LOC102793948,LOC103389239,LOC108251630 coding downstream 45618 2328511 ~ 2349442 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding downstream 67651 2350544 ~ 2352359 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding downstream 70755 2353648 ~ 2356348 (+)
desmb des,LOC103366968,LOC101472777 coding downstream 125002 2407895 ~ 2417552 (+)
LOC120554571 NA coding downstream 306117 2589010 ~ 2647401 (+)
G231564 NA non-coding upstream 64607 2214653 ~ 2216612 (+)
G231555 NA non-coding upstream 84841 2196040 ~ 2196378 (+)
G231503 NA non-coding upstream 170445 2042466 ~ 2110774 (+)
G231512 NA non-coding upstream 210377 2069157 ~ 2070842 (+)
G231495 NA non-coding upstream 369156 1856072 ~ 1912063 (+)
G231910 NA non-coding downstream 80000 2362893 ~ 2406781 (+)
G231935 NA non-coding downstream 141037 2423930 ~ 2436263 (+)
G231940 NA non-coding downstream 163938 2446831 ~ 2448437 (+)
G231955 LOC102192810 non-coding downstream 218331 2501224 ~ 2503301 (+)
G231961 NA non-coding downstream 247981 2530874 ~ 2532587 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 182470 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 489361 1716411 ~ 1791858 (+)
G231423 agap1,LOC101478076,LOC102798364,LOC103389825 other upstream 567817 1399732 ~ 1713402 (+)
sumo1 sumo1 other downstream 206242 2489135 ~ 2494174 (+)
G232031 NA other downstream 616920 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 1270685 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 2057601 4340494 ~ 4399319 (+)
G232425 NA other downstream 2134271 4417164 ~ 4418102 (+)

Expression


Co-expression Network