G231982



Basic Information


Item Value
gene id G231982
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2915115 ~ 2954253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU314810
ATCAGATCTGATAGCTCAGTGTGATGGAACGCTGGTTAAAAGACACAAAGGTTATGGGTTCCAATACAGGAATAAACaatttattttgagttttaCACCCAGAatgacaaagacaaatacacaaCTAACAATAAGCTTGGTGATCAGATCTGATAGCTCAGTGTGATGGAACGCTGGTTAAGAGACACAAAGGTTATGGGTTCCAACACAAGAACAGTCAATTTATTTTGAGCTTTACACCCAGAatgacaaagacaaatacaCCCGGAGAACAGCTGCATGCGTACGTGCGCTGGTGGCGCGGTTGGTTTGTCCTCGCCACTAAAGGCGCCAGTGACGGGTTCAAGACCAGCTCGGTATCAGCGTATGTGCACTTAGATAGGCCCCCCCAGATAGGAAAGAGAGGCTAGGAAAGGAAGTGCAGGCAAGGAGAGAGTAGGAGAGTATAAAGACAAGGACAGGCAGAGACCAGAGTAGGAAAactcagagaaagggagagaccagagtaggaAAACTCAGAGAAGAGTAGGACAcctcagagaaagggagaaacCAGAGTAGGACAactcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggaAAACTCAGAGAAGAGTAGCACACCTCcgagaaagggagagaccagagtaggacaACTCAGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacaactcagagaaagggagagaccagagtaggacaactcagagaaagggagagaccagagtaggacaACTCAGAGAAGAGTAGGACAcctcagagaaagaaagagaccagagtaggacaAAGGAAGAGAACATcctaatttaagaaaaaaaaaagtgaatttttttttcatggacaaaaaaataatttacgcCCACTTTTATGGCATGTACTGTGtacaactgtgtaataacactttttgacattttttttaaactttttgatagattttttgtcattaatacatgttataacaatgtaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU314810 True 1062 lncRNA 0.43 2 2915115 2954253

Neighbor


gene id symbol gene type direction distance location
zswim2 NA coding upstream 19260 2890550 ~ 2895855 (+)
col5a2b col5a2 coding upstream 43002 2844611 ~ 2872113 (+)
trnar-ccu_19 NA coding upstream 105075 2809968 ~ 2810040 (+)
trnar-ccu_18 NA coding upstream 105531 2809512 ~ 2809584 (+)
LOC120554411 lrrc3,LOC103365961,LOC100701732 coding upstream 124442 2787426 ~ 2790673 (+)
LOC120554431 osbpl11 coding downstream 566479 3520732 ~ 3539041 (+)
LOC120554783 LOC106527415,LOC107377197,LOC103370263 coding downstream 593976 3548229 ~ 3552016 (+)
LOC120554784 LOC106527415,LOC107377197,LOC103370263 coding downstream 624493 3578746 ~ 3581403 (+)
n6amt1 n6amt1,LOC102791235 coding downstream 648644 3602897 ~ 3604527 (+)
LOC120554447 LOC102195007 coding downstream 1163665 4117918 ~ 4120596 (+)
LOC120554419 NA non-coding upstream 2399 2909326 ~ 2912716 (+)
G232023 NA non-coding upstream 33385 2878845 ~ 2881730 (+)
G232020 dfnb59,LOC102786563 non-coding upstream 76560 2836601 ~ 2838555 (+)
G232018 NA non-coding upstream 79912 2834465 ~ 2835203 (+)
G231986 NA non-coding upstream 194713 2718593 ~ 2720402 (+)
G232046 NA non-coding downstream 19724 2973977 ~ 3030258 (+)
LOC120554423 NA non-coding downstream 311868 3266121 ~ 3266994 (+)
LOC120554428 NA non-coding downstream 360817 3315070 ~ 3355014 (+)
G232211 NA non-coding downstream 378081 3332334 ~ 3362794 (+)
LOC120554433 NA non-coding downstream 551594 3505847 ~ 3539041 (+)
G232031 NA other upstream 8629 2899813 ~ 2906486 (+)
sumo1 sumo1 other upstream 420941 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 816366 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 1123257 1716411 ~ 1791858 (+)
G231428 NA other upstream 1418508 1487274 ~ 1496607 (+)
LOC120554435 NA other downstream 599325 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 1386241 4340494 ~ 4399319 (+)
G232425 NA other downstream 1462911 4417164 ~ 4418102 (+)
scn1lab NA other downstream 1778209 4732462 ~ 4772995 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other downstream 1894385 4848638 ~ 4949089 (+)

Expression



Co-expression Network