G231983


Basic Information

Item Value
gene id G231983
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2712971 ~ 2916469 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314813
GCGCCAGTGACGGGTTCAAGACCAGCTCGGTATCAGCGTATGTGCACTTAGATAGGCCCCCCAGATAGGAAAGAGAGGCTAGGAAAGGAAGTGCGGGCAAGGAGAGAGTAGGAGAGTATTAAGACAAGGACAGGCagagaccagagtaggacaactcagagaaagggagagaccagagtaggacaACTCAGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacaccccagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacacctccgagaaagaaagagaccagagtaggacaCCTCCGAGAAAGGGAAAGACCAGAGTAGGACAactcagagaaagaaagagaccagagtaggacaCCTCCGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacaactcagagaaagaaagagaccagAGTAGGCCACctcagagaaaaggagagaccagagtaggacaAAGGAAGAGAACATCCTaatttaagaaaaagaaaattagattttaaaaaaaaaaaaattttatggACGAAAAAATAATTTACGCCCACTTTTATGGCATGTACTGTGtacaactgtgtaataacactttttgacatttttttttactttttgatagatttttgtcattaatacatgttataacaatgtaataactatgtaataacactttttgtgactttctgaTAGATTTTTGTCATAATACATgttataacaatgtaataactatgTAATAACACTTTTTGACATTATGTATGACTTTTCTgagctttttttgacataatacgTACTATTAGCCTacttacttttttattaaattatttcatgacatacaatactatgagtATACAGTGAGTACGGAGAGAAGAAGGCATGAATGGAGTGAAGGAACTTCTCCGTTGTGGTCCGGAAACTCTGCACTCATCTGGGgagaaaacaagagaaagaagagTTTATTGGATTGTTCTGCTTCAATACATCTGGGTCCATTTCTTTTCCTTAAGGAGGAATAAAAGACACCGAGACACAAGGTAGAGCTACTAGTGCTGAGAACTGTAGCTC
>TU314814
GCGCCAGTGACGGGTTCAAGACCAGCTCGGTATCAGCGTATGTGCACTTAGATAGGCCCCCCAGATAGGAAAGAGAGGCTAGGAAAGGAAGTGCGGGCAAGGAGAGAGTAGGAGAGTATTAAGACAAGGACAGGCagagaccagagtaggacaactcagagaaagggagagaccagagtaggacaACTCAGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacacctcagagaaagggagagaccagagtaggacaccccagagaaagaaagagaccagagtaggacaCCTCCGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacaactcagagaaagaaagagaccagAGTAGGCCACctcagagaaaaggagagaccagagtaggacaAAGGAAGAGAACATCCTaatttaagaaaaagaaaattagattttaaaaaaaaaaaaattttatggACGAAAAAATAATTTACGCCCACTTTTATGGCATGTACTGTGtacaactgtgtaataacactttttgacatttttttttactttttgatagatttttgtcattaatacatgttataacaatgtaataactatgtaataacactttttgtgactttctgaTAGATTTTTGTCATAATACATgttataacaatgtaataactatgTAATAACACTTTTTGACATTATGTATGACTTTTCTgagctttttttgacataatacgTACTATTAGCCTacttacttttttattaaattatttcatgacatacaatactatgagtATACAGTGAGTACGGAGAGAAGAAGGCATGAATGGAGTGAAGGAACTTCTCCGTTGTGGTCCGGAAACTCTGCACTCATCTGGGgagaaaacaagagaaagaagagTTTATTGGATTGTTCTGCTTCAATACATCTGGGTCCATTTCTTTTCCTTAAGGAGGAATAAAAGACACCGAGACACAAGGTAGAGCTACTAGTGCTGAGAACTGTAGCTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597055, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314813 True 1176 lncRNA 0.41 2 2712971 2916469
TU314814 False 1048 lncRNA 0.40 3 2712971 2916469

Neighbor

gene id symbol gene type direction distance location
gpd2 gpd2 coding upstream 9360 2677342 ~ 2703611 (+)
LOC120554571 NA coding upstream 65570 2589010 ~ 2647401 (+)
desmb des,LOC103366968,LOC101472777 coding upstream 295419 2407895 ~ 2417552 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding upstream 356623 2353648 ~ 2356348 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding upstream 360612 2350544 ~ 2352359 (+)
LOC120554431 osbpl11 coding downstream 604263 3520732 ~ 3539041 (+)
LOC120554783 LOC106527415,LOC107377197,LOC103370263 coding downstream 631760 3548229 ~ 3552016 (+)
LOC120554784 LOC106527415,LOC107377197,LOC103370263 coding downstream 662277 3578746 ~ 3581403 (+)
n6amt1 n6amt1,LOC102791235 coding downstream 686428 3602897 ~ 3604527 (+)
LOC120554447 LOC102195007 coding downstream 1201449 4117918 ~ 4120596 (+)
LOC120554414 NA non-coding upstream 2810 2706291 ~ 2710161 (+)
G231981 NA non-coding upstream 16098 2696479 ~ 2696873 (+)
G231908 LOC106524675,LOC101166777,LOC104929096,LOC107396539,LOC106920551,LOC102795669,LOC102310614 non-coding upstream 54486 2653969 ~ 2658485 (+)
G231961 NA non-coding upstream 180384 2530874 ~ 2532587 (+)
G231955 LOC102192810 non-coding upstream 209670 2501224 ~ 2503301 (+)
LOC120554422 NA non-coding downstream 24776 2941245 ~ 2945534 (+)
LOC120554415 NA non-coding downstream 30227 2946696 ~ 2949292 (+)
LOC120554421 NA non-coding downstream 32971 2949440 ~ 2950429 (+)
G232046 NA non-coding downstream 57508 2973977 ~ 3030258 (+)
LOC120554423 NA non-coding downstream 349652 3266121 ~ 3266994 (+)
sumo1 sumo1 other upstream 218797 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 614222 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 921113 1716411 ~ 1791858 (+)
LOC120554068 agap1,LOC101478076 other upstream 1191907 1468168 ~ 1521064 (+)
LOC120554435 NA other downstream 637109 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 1424025 4340494 ~ 4399319 (+)
G232425 NA other downstream 1500695 4417164 ~ 4418102 (+)
scn1lab NA other downstream 1815993 4732462 ~ 4772995 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other downstream 1932169 4848638 ~ 4949089 (+)

Expression


Co-expression Network