G231986


Basic Information

Item Value
gene id G231986
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2718593 ~ 2720402 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314818
tttctttcatttgtttttattgaaactGGAGAATACAGAGTCAGACATTTCTAATCAGACACTTGATTCACAAACTTAATATTCAAGTTACCGCCATGTAATATGGAGCAACAcggataataaaacaaatgacatttaaaaacagataTTTTTCACATAATAATGGTGAAAAACTCTTGACGTCTTTGGAGTTTGATTATGACATTGGAGATGAGATAATATATTGTCATTTCCAGATTCCCTGGTTTCATTGTACATTCAAGAAAGAGCTGTCAGTGATAATATCCTCACCATGACCCAGACGTCCTATCATTGTGTGAGCAAACTGCTCCATCTTAAGGCCAAGATTTCTTCTACATCCCATTCATTTACCAAAAAGGGGGGCGAGATGCATTTGCTTCCTGTTGCAAATCAAACATGGCTGATCTTTGCAAGTCTACCGGGGTTGAGGGGGGCGAACATGACGTCTCATTCAAGAAGCATTGATTGTTGCAGTTTTAGGATTTCCTTATGTGTATAATAACTGTATGTTGAAAGACGTCAAGCAGCAGAGTAGGAGATATGCTTCTAGTCTCTTTCTGGCCATAATGTAAAGGATAATTCCAGTTTTTCATACTTTTTTACAACTTGAATTTTTGTGGCCAGAGATCTTGCAGCAACATTGTTAAACAGGATAAGATCCACTACGTAGACGTGTGGCATATAAAGAACGGAAGATGGATCTTTTGTGTTGTAGCCCCAATTTTTGTTTAATGTTAATAAATGTTGCCTCATTGCATCTGGATGTGATTCTAATTATACATTTACATctgtattttatgtaatttgCAAGTTCAACCAATattgaaatatatatatatatatatatagtggctTGATTTGCAGCTGTTGCATTCTGGTAACTATGCTAATAGGTGAATAATGTTTCTAAACAACTTCATTTCATGAGTTTCATGATCATTAGTCATATTTTTAAGACTTGTGATAACAATATAGAGTACACATAGAAACATATCTGATCACATTAATTAAATGGCAAAATTATGACTTGATTTTATCAAAACCTACTATACTTACTACTTACTTTGACCTATATACATATTCTAATTACTGTGCATATAATACACTATTTCTGATGTTACTGTACATCAAATTACTGATTAGGAGATGAAAAATACAGATGAGGGGAAGTTATATGTAGAAATTGcacatgtaaacacaaacacacacacactcttgcatTCATATCTTCAACAAGAAGTTGTCTCAGATTTGACACAGACCTTTTTTTGAATTAATTTGAGGCCGACATGCTGGCGAATATTTACAATCAGTCTTTGAAATCAGAGACACGACATTATAGAAATAAAGCATTTTTTGTACAACAGGAAATGAGTTTGGCTGCAGGTCAGAATGTGTCCTCTTGCACTGAACTGCTCTTGGGAAAAGCTCTAAAAAAAGCTGCAGTGGTGAAGTATGTCTTAATGCTGCCGTCTGCCACTAGAGAGCAGTAGTCATCCATTTCCTCCACAGTTTCAATTGCATGGAGTGCTACTTACTTTCtccatattttacaataaatcaGACTCTCAGTCAGGTCTATAAATTCTCCACTTTTGGTGATAATCCCACTGAAGTTCCTTGGGCGTCACCACTGACTCCAGCCGTCCTGCTCTGCACAGTAAGTTGAGTCTCACAACCAAACGTCCAAACTCAGACCCTAATGATGCTGATGGAGGAGGAGGCTCTGTGGag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314818 True 1755 lncRNA 0.36 2 2718593 2720402

Neighbor

gene id symbol gene type direction distance location
gpd2 gpd2 coding upstream 14982 2677342 ~ 2703611 (+)
LOC120554571 NA coding upstream 71192 2589010 ~ 2647401 (+)
desmb des,LOC103366968,LOC101472777 coding upstream 301041 2407895 ~ 2417552 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding upstream 362245 2353648 ~ 2356348 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding upstream 366234 2350544 ~ 2352359 (+)
LOC120554407 LOC103139210,LOC108250327,LOC102796576,LOC106535979,LOC101488115,LOC106920547,LOC106529907,LOC102199060,LOC102308458 coding downstream 35473 2755875 ~ 2781916 (+)
LOC120554411 lrrc3,LOC103365961,LOC100701732 coding downstream 67024 2787426 ~ 2790673 (+)
trnar-ccu_18 NA coding downstream 89110 2809512 ~ 2809584 (+)
trnar-ccu_19 NA coding downstream 89566 2809968 ~ 2810040 (+)
col5a2b col5a2 coding downstream 124209 2844611 ~ 2872113 (+)
G231984 NA non-coding upstream 1764 2714977 ~ 2716829 (+)
LOC120554414 NA non-coding upstream 8432 2706291 ~ 2710161 (+)
G231981 NA non-coding upstream 21720 2696479 ~ 2696873 (+)
G231908 LOC106524675,LOC101166777,LOC104929096,LOC107396539,LOC106920551,LOC102795669,LOC102310614 non-coding upstream 60108 2653969 ~ 2658485 (+)
G231961 NA non-coding upstream 186006 2530874 ~ 2532587 (+)
G232018 NA non-coding downstream 114063 2834465 ~ 2835203 (+)
G232020 dfnb59,LOC102786563 non-coding downstream 116199 2836601 ~ 2838555 (+)
G232023 NA non-coding downstream 158443 2878845 ~ 2881730 (+)
LOC120554419 NA non-coding downstream 188924 2909326 ~ 2912716 (+)
G232035 NA non-coding downstream 190874 2911276 ~ 2950460 (+)
sumo1 sumo1 other upstream 224419 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 619844 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 926735 1716411 ~ 1791858 (+)
LOC120554068 agap1,LOC101478076 other upstream 1197529 1468168 ~ 1521064 (+)
G232031 NA other downstream 179411 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 833176 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 1620092 4340494 ~ 4399319 (+)
G232425 NA other downstream 1696762 4417164 ~ 4418102 (+)
scn1lab NA other downstream 2012060 4732462 ~ 4772995 (+)

Expression


Co-expression Network