G232020 (dfnb59,LOC102786563)


Basic Information

Item Value
gene id G232020
gene name dfnb59,LOC102786563
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2836601 ~ 2838555 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU314863
CTTCTCTGAAGGGGCTTCCATAGATGATTCCAGACAGGAAACGACGCAGTCGGCCCATGGAGAAGTGACCGATGAAACCACCGAGCTGCTCCCTGATCTGCTCCCGCTCAAATCCACCCTGAGACTCCGGGGCTACACAGATATCTCGTCCGTCCAGTCGAACAAACAGCTCACAGATGCTGAATGCGATGGTGGTGTGAGCCGGAATGACGATGGCCTTGTCTCGACCTTTAGGATTCCTTCCATCGTCGAtctgaaactgcagaaacaGAAAGCGGAGTGACTGACCATGAGATAAAAGAATAATCTGCATTTGAGACAAATCACGGCGAGGCACTTCATCTGAAAATCTCAATTTCTTGATTGAGATATTTCAGAATGTAGCATTCAAAGCAAGACAAAAATGGAGGCAACTGTAGCAACAAATGACACTTACAGGATAATAGTAAATGCCAAAATGTAGCATAAGAGTACATAATGAAGGTCCTCTTCATTAGTAATATTTGTTAGCATTTGTATGCTGTAGCTCTTATGTTACGGGTAAATGAAATAAAGCACAAACGCaaagttttgaatgttaattAAAACGTCTTGTGGATTTTGCAGCTGGTGTTGGTTGGAGGCCAGACCTGTCAAGAGAAACACATGCACTCAGTTTGCTAGTTTGGTTACCTAAACATGCAGTATTGTGTAATCTCTGCTTGATTAATTGAATGCTGGTTAACTATTGATTTTGcaattttaaaaagtttttgttCAAGTTACTCACCTCTGAT

Function

symbol description
dfnb59 pejvakin

NR:

description
PREDICTED: pejvakin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU314863 True 776 lncRNA 0.42 2 2836601 2838555

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_19 NA coding upstream 26561 2809968 ~ 2810040 (+)
trnar-ccu_18 NA coding upstream 27017 2809512 ~ 2809584 (+)
LOC120554411 lrrc3,LOC103365961,LOC100701732 coding upstream 45928 2787426 ~ 2790673 (+)
LOC120554407 LOC103139210,LOC108250327,LOC102796576,LOC106535979,LOC101488115,LOC106920547,LOC106529907,LOC102199060,LOC102308458 coding upstream 54685 2755875 ~ 2781916 (+)
gpd2 gpd2 coding upstream 132990 2677342 ~ 2703611 (+)
col5a2b col5a2 coding downstream 6056 2844611 ~ 2872113 (+)
zswim2 NA coding downstream 51995 2890550 ~ 2895855 (+)
LOC120554431 osbpl11 coding downstream 682177 3520732 ~ 3539041 (+)
LOC120554783 LOC106527415,LOC107377197,LOC103370263 coding downstream 709674 3548229 ~ 3552016 (+)
LOC120554784 LOC106527415,LOC107377197,LOC103370263 coding downstream 740191 3578746 ~ 3581403 (+)
G232018 NA non-coding upstream 1398 2834465 ~ 2835203 (+)
G231986 NA non-coding upstream 116199 2718593 ~ 2720402 (+)
G231984 NA non-coding upstream 119772 2714977 ~ 2716829 (+)
LOC120554414 NA non-coding upstream 126440 2706291 ~ 2710161 (+)
G231981 NA non-coding upstream 139728 2696479 ~ 2696873 (+)
G232023 NA non-coding downstream 40290 2878845 ~ 2881730 (+)
LOC120554419 NA non-coding downstream 70771 2909326 ~ 2912716 (+)
G232035 NA non-coding downstream 72721 2911276 ~ 2950460 (+)
G231982 NA non-coding downstream 76560 2915115 ~ 2954253 (+)
LOC120554422 NA non-coding downstream 102690 2941245 ~ 2945534 (+)
sumo1 sumo1 other upstream 342427 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 737852 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 1044743 1716411 ~ 1791858 (+)
LOC120554068 agap1,LOC101478076 other upstream 1315537 1468168 ~ 1521064 (+)
G232031 NA other downstream 61258 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 715023 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 1501939 4340494 ~ 4399319 (+)
G232425 NA other downstream 1578609 4417164 ~ 4418102 (+)
scn1lab NA other downstream 1893907 4732462 ~ 4772995 (+)

Expression


Co-expression Network