G232422


Basic Information

Item Value
gene id G232422
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 4355025 ~ 4414011 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU315499
TTAGCATTAGATCTTTATTTCTCATGTCACTTTGAAAGCTTGCAAGGAGCTTACATTTAACTTGGGAATCCTCAAATGACACAAGCAAAGATTATATACAGTACTATAAACTGTCAGCTATGATAAAGGAGACCAAATGTACACATTTTGTAGTTATTTCCGTAGCATATGTTTTTCTTTAAGGTATAGATATTTATTTTGCCGGAGGCAGGTGCCCATATCCATAAAGCATTCCATATTTCCATACTTAACTCTCTGCAGTTATAAAAATATCagatatttctttatttctttcaatCCCTGTGTTGACAAGTGCGTCTTGATGCAACTCCTCAACATTATTGCTGCATTAGCACAGTAGTAAATTGTGGAACTCTTAAGTAAACATATATAggaaaacatggctattagcaacttttttcattttgtttttttttctccctcttacAGGTTTCTTTAAATACTCGACACACTTTCAAAGTGCAAAAAACTgatctgaaaattaaaaaacaaaaaggtgcaAATCATACTACAAACATCTGGTGAGAGCATAAAAGAGGACATGGCACTTCTAGCACGGTGTGGAAGTGAGAACAGAAATGTCTGGAGGGAGGAAATAAAGATGGCGTTGATGTCTGCAGCTTGGCTTGTCCCGCTCTACGGTGTGGTTTGGCCTTGAGCAATTGTCATAATGCGATGCCTACGATGGTCCTTGCTAGTTCCTCCTCGCCTCCACTTCTTAAGTAATGCTAAGGATAAATTACAAGccaagggaaaaaaataatacttcaCATGATAATCAGCATTCAACCGCCTATAGTGGTTCCCCCTTGTAATTGTTCTCGGCTCCACTCAATACTGTTTACTCTCATTTAAAGAGCCACTGCCGACACAGAGCTACCTCAATTCTCGTCCTAAACAATTAATTAAATTGTCTAAACATAAGTACAGGTaggtcccccccccacccccctgactacagaaacaaaagaaaagcttCTGCCTCTAAACAAAGTAAGCTTAGTATCATAGTTAGATTGATGATTCAGCAGGTGATTGAAATGAAAACTCAGTCACTTAGAAGGAAAACGCTGACGAACACTGAACCGAATTCCACTCACTGACGAGTAAAATCAACTAAGTCTCTGATGAAATGTCAGAacgtagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctcaaAAAGGCAAGGCATTTTCTGTTCCGTTTGAGTAACTTGAAATCTTTTAAGTatctacttttaaacattatctaCAAAATGCGCATGACCATTTTGTACACAGTGATTCATTTCCCGCAATGACAACTTGTAATCATGTACAGCATGGcgacgccccccccccctcccctcctcctcccactgCCTCGGAGGACAAAGTCCACTTAAAGCACTTTACCTGAGGTTTCATAAAGAATGCTGCAATTTGCCTTTAACAGGGAGTCTTACATACACAAAgcacacgtgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcagCTTGCACACTAAGATAATATCCCTGCAGGTTCATCAAGCATGCTTTCAGAGGTTCTGGGAATATGACGCCTGCATGAAGAGGGGGGATTGAAGTCTTAGATTGGGGATTTTTCGGCTCCTTGGCGAGCAAATTCCATGTTGAGACTCCATGGTGTGAGGCTGGAGAAGTCTCGCATGTGCAGAGCTCAGAGTCCGACTTGGCTGTTGCTGTTTTTCTGGTGGTCTGGCTCCGACTCAGAGTCTTGTCCCATCGCAGCCGATTCCACGGGTTCTGCTGCCCCCTGAACATCTCCTCTCTTAAGTGGCTAAAGAAGCTCTGCAACGTGTTTCTGTTATCCTCCGCTTTGGagttcagtctttttttt
>TU315500
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcagCTTGCACACTAAGATAATATCCCTGCAGGTTCATCAAGCATGCTTTCAGAGGTTCTGGGAATATGACGCCTGCATGAAGAGGGGGGATTGAAGTCTTAGATTGGGGATTTTTCGGCTCCTTGGCGAGCAAATTCCATGTTGAGACTCCATGGTGTGAGGCTGGAGAAGTCTCGCATGTGCAGAGCTCAGAGTCCGACTTGGCTGTTGCTGTTTTTCTGGTGGTCTGGCTCCGACTCAGAGTCTTGTCCCATCGCAGCCGATTCCACGGGTTCTGCTGCCCCCTGAACATCTCCTCTCTTAAGTGGCTAAAGAAGCTCTGCAACGTGTTTCTGTTATCCTCCGCTTTGGagttcagtctttttttt

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU315499 True 1929 lncRNA 0.42 2 4411964 4414011
TU315500 False 430 lncRNA 0.50 2 4355025 4414011

Neighbor

gene id symbol gene type direction distance location
ical1 ica1l,LOC102780100 coding upstream 94352 4248430 ~ 4260673 (+)
wdr12 wdr12,LOC107087339,LOC102780757 coding upstream 107244 4242043 ~ 4247781 (+)
nop58 nop58,LOC102781044 coding upstream 113742 4235489 ~ 4241283 (+)
LOC120554468 LOC103359857,LOC101070054,LOC100705556,LOC102305952 coding downstream 11653 4425664 ~ 4470539 (+)
gca LOC104926393,LOC101070744,LOC103474249,LOC103354601 coding downstream 77632 4491643 ~ 4501099 (+)
xirp2a xirp2,LOC103474301 coding downstream 382296 4796307 ~ 4844799 (+)
LOC120554483 LOC104926398,LOC103354589,LOC104942249 coding downstream 581732 4995743 ~ 4998421 (+)
LOC120554477 LOC103354588,LOC106960074,LOC106930318,LOC103147191,LOC103474384 coding downstream 630010 5044021 ~ 5050862 (+)
G232383 NA non-coding upstream 87988 4263856 ~ 4267037 (+)
LOC120554455 NA non-coding upstream 122945 4198837 ~ 4232080 (+)
trnam-cau_65 NA non-coding upstream 131101 4223852 ~ 4223924 (+)
G232338 NA non-coding upstream 137563 4215167 ~ 4217462 (+)
trnag-gcc_26 NA non-coding upstream 146317 4208638 ~ 4208708 (+)
G232426 NA non-coding downstream 4562 4418573 ~ 4419316 (+)
LOC120554498 NA non-coding downstream 90341 4504352 ~ 4507461 (+)
G232449 NA non-coding downstream 93471 4507482 ~ 4507933 (+)
G232453 NA non-coding downstream 97859 4511870 ~ 4512097 (+)
LOC120554506 NA non-coding downstream 98601 4512612 ~ 4513959 (+)
LOC120554435 NA other upstream 764146 3553578 ~ 3590879 (+)
G232031 NA other upstream 1448539 2899813 ~ 2906486 (+)
sumo1 sumo1 other upstream 1860851 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 2256276 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 2563167 1716411 ~ 1791858 (+)
G232425 NA other downstream 3153 4417164 ~ 4418102 (+)
scn1lab NA other downstream 318451 4732462 ~ 4772995 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other downstream 434627 4848638 ~ 4949089 (+)
LOC120554464 LOC103354592,LOC107380990,LOC103389749,LOC106930317,LOC103147190,LOC106960073,LOC105020031,LOC106574546,LOC108438056,LOC106575308 other downstream 589310 5003321 ~ 5041882 (+)
LOC120554524 nhlh2,LOC104936900,LOC103370041,LOC108245682,LOC101487065,LOC107087002 other downstream 1074150 5488161 ~ 5498524 (+)

Expression


Co-expression Network