G232688


Basic Information

Item Value
gene id G232688
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 5183223 ~ 5184103 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU315852
GTTCAACTCCTTTATGGCAAACTATATTTTAAGGTCCAACACCCAAAATGAAAATACACAACTAAACACATGCCAATTGTTGACAGTTTAGATAGCTTGGTGTGATGAGACGCTGGTTGGTAGACACAAAGGTTATGGGTTCCAATACAGGAATTGACAATTTATTTTGAGTTGTACACCCAGAatgacaaagacaaatacacaaCTAACCACAAGCTTGGTGATCAGATGTGATAGCTCAGTGTGATGGAACGCTGGTTAAGAAACACAAAGGTTATGGGTTCCAACACAAGAACAGTCAATTTATTTTGAGCTTTACACCCAGCatgacaaagacaaatacaCCCGGAGAACAGTTGCATGCGTACGTGCGTTGGTGGCGGTGATTTGGTTTGTCCCCCGCCACTAAAGGCGCCAGTGACGGGTTCAAGACCAGCTCGGTATCAGCGTATGTGCACTTAGATAGGCCCCCCAGATAGGAAAGCGAGGCTAGGAAAGGAAGTGCAGGCAAGAAGAGAGTAGGAGAGTATTAAGACAAGGACAGGCAGAAACCAGAGTAGGACAACTCAGAGAAGAGTAGGACAcctcagagaaagggagagaccagagtaggacacctcagagacagggagactagagtaggacacctcagagaaagggagagaccagagtaggacaCCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU315852 True 684 lncRNA 0.46 2 5183223 5184103

Neighbor

gene id symbol gene type direction distance location
LOC120554463 abcc4,LOC102196569,LOC100702162,LOC102309803 coding upstream 17029 5134856 ~ 5166194 (+)
dzip1 LOC102776338 coding upstream 74318 5094251 ~ 5108905 (+)
LOC120554486 NA coding upstream 128241 5051007 ~ 5054982 (+)
LOC120554477 LOC103354588,LOC106960074,LOC106930318,LOC103147191,LOC103474384 coding upstream 132361 5044021 ~ 5050862 (+)
LOC120554483 LOC104926398,LOC103354589,LOC104942249 coding upstream 184802 4995743 ~ 4998421 (+)
acp2 acp2 coding downstream 109064 5293167 ~ 5306737 (+)
txndc16 txndc16 coding downstream 136015 5320118 ~ 5335281 (+)
nid2a LOC103358232 coding downstream 199060 5383163 ~ 5428369 (+)
LOC120554521 LOC106575534,LOC106575594 coding downstream 260549 5444652 ~ 5455756 (+)
poglut1 poglut1 coding downstream 394863 5578966 ~ 5584996 (+)
LOC120554496 NA non-coding upstream 2955 5172389 ~ 5180268 (+)
G232691 NA non-coding upstream 4807 5177569 ~ 5178416 (+)
G232670 NA non-coding upstream 66832 5116042 ~ 5116391 (+)
LOC120554502 NA non-coding upstream 97098 5060799 ~ 5086125 (+)
G232595 atp5b,LOC103392222 non-coding upstream 180556 5000445 ~ 5002667 (+)
G232699 fam155a,LOC104929881,LOC100704860,LOC101466237,LOC102313546,LOC102786507 non-coding downstream 18798 5202901 ~ 5206988 (+)
G232704 NA non-coding downstream 86684 5270787 ~ 5275253 (+)
LOC120554562 NA non-coding downstream 444297 5628400 ~ 5630828 (+)
G232682 NA non-coding downstream 446825 5630928 ~ 5633017 (+)
G232741 NA non-coding downstream 451898 5636001 ~ 5636547 (+)
LOC120554464 LOC103354592,LOC107380990,LOC103389749,LOC106930317,LOC103147190,LOC106960073,LOC105020031,LOC106574546,LOC108438056,LOC106575308 other upstream 141341 5003321 ~ 5041882 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other upstream 234134 4848638 ~ 4949089 (+)
scn1lab NA other upstream 410228 4732462 ~ 4772995 (+)
G232425 NA other upstream 765121 4417164 ~ 4418102 (+)
dock9b LOC103359855 other upstream 783904 4340494 ~ 4399319 (+)
LOC120554524 nhlh2,LOC104936900,LOC103370041,LOC108245682,LOC101487065,LOC107087002 other downstream 304058 5488161 ~ 5498524 (+)
LOC120554525 vangl1,LOC102194868,LOC101486397,LOC102297404 other downstream 324985 5509088 ~ 5568201 (+)
fdx1 fdx1 other downstream 620932 5805035 ~ 5813194 (+)
LOC120554182 steap3,LOC103360323 other downstream 1257592 6441695 ~ 6453327 (+)
LOC120554601 mest other downstream 3438002 8622105 ~ 8628297 (+)

Expression


Co-expression Network