LOC120554082


Basic Information

Item Value
gene id LOC120554082
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10383688 ~ 10387933 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU317405
CCCGCCTTCTTCAGAAGAGTATACTTCTCTGTCTGTCGCAGTGAACAAGAAACTTCAACACCTCAGACACCAAAATGATCAATTGGAAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCA
>TU317407
CCCGCCTTCTTCAGAAGAGTATACTTCTCTGTCTGTCGCAGTGAACAAGAAACTTCAACACCTCAGACACCAAAATGATCAATTGGAAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCAGCTTTGTGCCAAacttgtgttattacattaaatAGTTTGTTCCACATGGTACAATATTGTTGTGCCTCAATTTCCCAGACTTtgtaggggggggggaaaccCCTAAGGGTACTTATCTCTCCTTAGTGGCTACATTGTTTCCACTGAAGTGC
>TU317408
CCCGCCTTCTTCAGAAGAGTATACTTCTCTGTCTGTCGCAGTGAACAAGAAACTTCAACACCTCAGACACCAAAATGATCAATTGGAAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCAGCTTTGTGCCAAacttgtgttattacattaaatAGTTTGTTCCACATGGTACAATATTGTTGTGCCTCAATTTCCCAGACTTtgtaggggggggggaaaccCCTAAGGGTACTTATCTCTCCTTAGTGGCTACATTGTTTCCACTGAAGTGCTTCTCTGTTTTTAAGCAGAATGTCACCTTGTGTCTGCTTTTATCAGTCTTAAACTCTAATAATAATGGAGTGTTCCAGCATTCTGATTACTGTCCAAATAGTTCTTACTAATTTTCCtaaggtgtttttttattttttattttattttttaactacaTGATTTATCATAGTCCCCCACACGGGTGTCGATGGCAGTTTCTATTCCTGGCAAGACAACTGGTCTATTTTATGTATTAAGTAAATTTCTGTCCTCCATACTACATTTTGacagtttttgctttgtttttcagAGCTCTGTCTCCAGTGAAGAAGCAGCAACGTCCTCTGCAGTTTGTAAAGAGAAGTGAAAAAGCTTGTAGCTTAGCCTTATAAATATTAGTAGTCTTATTATTTTACATGTAGATCGTTTTGAAACAAGACACATCAttttactatttaaaaaaaaaaaaaaaaaaaaaaaatccaaaataaCGCACAGTTCTGTCCCAGTTACAATATGCTATATTATATAACGTATTAGGCCTACTTAGTGAGCAGCATGTTCATGTGGTAGCGGAATGTTTCTATAAATGCACACAGATTAATGAtcaatatctttaaaaatagTATTTCTGGTTACGGCCATAACACCCTGAACACGCTCGATCTCGGACCAGGGTCCGGTCTGGTCAGCAGGTCTACTTGGATGAGAGACCGCCTGGGAATACCGGGTGCTGTAAGCTCCTTTTACTCCTGTACAAACAGCAGAGGGTGCTGCTGCTTCTTCAATGGAAAGACAAtttaatcaccaacagactaaataaagaagaaataaaataatatagttAACAACTCGTCCatgatgtaaaatgtaaatatgccaTTAGGATTCGACACTCCTTGTTTTTACTTTTCAACAGGGTCAACATACATAGCCTAGCCTACATGTTTCAACCTTATTTTTTACACTCGACGGCCTTTTTTGTAGCTACTTTTAATTAGGCTACAGTAGGCTACTAGAGCTATGCACTTtacttaaccctcatgttgtcctcggctcaaatttgacccgttttcaaagtttctacatcagaaatatgGCTttcttttcaaccaaatttcccaaaaataacatgattGGTTCCATCCGCTAAGTTGATTATCACTACTGTTGGTCTACCCGG
>TU317411
TAGACAACAGCGGTTACTGCCCTGGAGTTTGTCTAACAGCTGACTTTTTCTGTTAACAAGCTCCAGCACATAGCAACGCCGCTCCATCGCTTTTCTGTAAAATGAAAGTGCCTTCAAATGCGGTCGGAAATGCTCGATATATTTATCGAGCTGACGGAAAACAATCATTGTGAAATATCAAGTCTagctacttgtgctacattgagGGTTACAGacacaaatgggccatttaaGTGACACTCCCACCACCGCGCAACGCTGTGGCCAATCGCCGGACCGAGTGATCTTTAGCTAGTGCGTTTAGGCTGCGGCGGTTGGGGGCCGAGAAAAACCTCAGAGGCCTGGGCAGCGAAAAGTTGAGACATATTCAACTTTTGAAGAAGGGCAACCCCGATGTCAACCTGCGGTGGCTAATCGTGTAACTGGCGATCATGTCAGTCCGTTTTGAGGAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCA
>TU317412
CCTACGTCTAACGTAGACTGCATTTCGATTGGCCTGTACACGTCACTCACTACAAGACCCGCCTTCTTCAGAAGAGTATACTTCTCTGTCTGTCGCAGTGAACAAGAAACTTCAACACCTCAGACACCAAAATGATCAATTGGAAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCAGCTTTGTGCCAAacttgtgttattacattaaatAGTTTGTTCCACATGGTACAATATTGTTGTGCCTCAATTTCCCAGACTTtgtaggggggggggaaaccCCTAAGGGTACTTATCTCTCCTTAGTGGCTACATTGTTTCCACTGAAGTGCTTCTCTGTTTTTAAGCAGAATGTCACCTTGTGTCTGCTTTTATCAGTCTTAAACTCTAATAATAATGGAGTGTTCCAGCATTCTGATTACTGTCCAAATAGTTCTTACTAATTTTCCtaaggtgtttttttattttttattttattttttaactacaTGATTTATCATAGTCCCCCACACGGGTGTCGATGGCAGTTTCTATTCCTGGCAAGACAACTGGTCTATTTTATGTATTAAGTAAATTTCTGTCCTCCATACTACATTTTGacagtttttgctttgtttttcagAGCTCTGTCTCCAGTGAAGAAGCAGCAACGTCCTCTGCAGTTTGTAAAGAGAAGTGAAAAAGCTTGTAGCTTAGCCTTATAAATATTAGTAGTCTTATTATTTTACATGTAGATCG
>XM_039792679.1
AGTTTGTCTAACAGCTGACTTTTTCTGTTAACAAGCTCCAGCACATAGCAACGCCGCTCCATCGCTTTTCTGTAAAATGAAAGTGCCTTCAAATGCGGTCGGAAATGCTCGATATATTTATCGAGCTGACGGAAAACAATCATTGTGAAATATCAAGTCTagctacttgtgctacattgagGGTTACAGacacaaatgggccatttaaGTGACACTCCCACCACCGCGCAACGCTGTGGCCAATCGCCGGACCGAGTGATCTTTAGCTAGTGCGTTTAGGCTGCGGCGGTTGGGGGCCGAGAAAAACCTCAGAGGCCTGGGCAGCGAAAAGTTGAGACATATTCAACTTTTGAAGAAGGGCAACCCCGATGTCAACCTGCGGTGGCTAATCGTGTAACTGGCGATCATGTCAGTCCGTTTTGAGGAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCAGCTTTGTGCCAAacttgtgttattacattaaatAGTTTGTTCCACATGGTACAA
>XM_039792680.1
GTAGACTGCATTTCGATTGGCCTGTACACGTCACTCACTACAAGACCCGCCTTCTTCAGAAGAGTATACTTCTCTGTCTGTCGCAGTGAACAAGAAACTTCAACACCTCAGACACCAAAATGATCAATTGGAAGGCTTTGGACAATGTCCCCATGCTTCTGTACATCCTGGCCCTGAAGACGCTGCTGCTGTGTATGGCGTTTGCCGGGGCGAAGATCTACCAGAGTAAGAAAGCAGAGCAGGCCCTGAAGAAGCAGCAGGATGAGAGGAGGAGGCTGGCCCAGCAGACGCAGGAGCTCCTAGACAACAAGAAGGAGGACTGAGCAGAGAGGAGAAGCTGCTCTACACGGGGAGACGCGTTACCGACCTGAGGAACAAGCCACCTACTCCACATAGGAGCCAGATGTCTGACTGTCAGCAGCAGGAGGACATTCCTGTGCTTTAGGAAATTGTTTGTGGTTCCAGTAccagttttttatatatatatatatctatatatatatatatatatatattgtgtaaatgtttgaCTGAACTTGGTTTTTATGAAATGAAGTTCTAGCAGCAACCATGTGGTCTCACTGAAGTGAGACTAAGACGAGGGACTGTTAAACAGAGATGGACTCGGTATAAGAACCACAGCAGAATCATTTACACAACACCCACTCCTTTTTGGAGCCTCATCTTTTGTCTCGTTTTATACTTGTAGATCTCAACACTACAATTATCTTCACTTTGTACACCGGGATAGTGGTAGAATCAAAGCTTGTCAAATCTACATATTTTTAAGAATACAGCATGGTATTTATTCTGTAATATTCTTTGCAATTTGTGAGCCAGCTTTGTGCCAAacttgtgttattacattaaatAGTTTGTTCCACATGGTACAA

Function

GO:

id name namespace
GO:0070469 respirasome cellular_component

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU317405 False 794 TUCP 0.44 3 10385003 10387876
TU317407 False 946 TUCP 0.43 3 10384851 10387876
TU317408 True 2109 lncRNA 0.39 3 10383688 10387876
TU317411 False 1157 TUCP 0.46 3 10385003 10387598
TU317412 False 1409 TUCP 0.41 3 10384445 10387933
XM_039792679.1 False 1186 mRNA 0.45 3 10384949 10387573
XM_039792680.1 False 893 mRNA 0.43 3 10384949 10387921

Neighbor

gene id symbol gene type direction distance location
kpnb3 ipo5 coding downstream 96527 10275031 ~ 10287161 (-)
harbi1 harbi1 coding downstream 118566 10261823 ~ 10265122 (-)
unc50 unc50 coding downstream 168216 10208422 ~ 10215472 (-)
sox1b sox1,LOC104929113,LOC102792425 coding downstream 421168 9960572 ~ 9962520 (-)
tubgcp3 tubgcp3 coding downstream 530128 9840242 ~ 9853560 (-)
gpr180 gpr180,LOC102794014 coding upstream 2018 10389951 ~ 10398975 (-)
ddx3xb LOC101487926 coding upstream 24502 10412435 ~ 10428605 (-)
slc5a3a slc5a3,LOC104962291 coding upstream 47381 10435314 ~ 10443050 (-)
LOC120554088 ptgfrn coding upstream 143894 10531827 ~ 10542635 (-)
LOC120554089 NA coding upstream 164016 10551949 ~ 10591069 (-)
LOC120554081 NA non-coding downstream 8757 10372988 ~ 10374931 (-)
G233685 LOC103356767 non-coding downstream 161513 10220878 ~ 10222175 (-)
G233675 LOC104966322 non-coding downstream 176213 10206152 ~ 10207475 (-)
LOC120554344 NA non-coding downstream 187312 10191223 ~ 10196376 (-)
LOC120554591 NA non-coding downstream 233272 10129535 ~ 10150416 (-)
G233855 NA non-coding upstream 337196 10725129 ~ 10725359 (-)
G233857 NA non-coding upstream 349702 10737635 ~ 10738167 (-)
G233858 NA non-coding upstream 350404 10738337 ~ 10738549 (-)
G233859 NA non-coding upstream 355141 10743074 ~ 10743463 (-)
G233872 LOC103371278,LOC105416747,LOC103151953,LOC102216808,LOC101483471,LOC108246769 non-coding upstream 386236 10774169 ~ 10775658 (-)
G233703 atg13 other downstream 110829 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 206878 10152861 ~ 10176810 (-)
G233644 NA other downstream 341282 9965692 ~ 10042406 (-)
G233510 LOC103372156,LOC102206165,LOC102306683 other downstream 755747 9525789 ~ 9627941 (-)
G233521 zc3h13,rpl31,LOC106575915,LOC102795706 other downstream 824848 9553485 ~ 9558840 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other upstream 76389 10464322 ~ 10525085 (-)
G233954 NA other upstream 560535 10948468 ~ 10969110 (-)
LOC120554127 NA other upstream 649422 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 748694 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 1000619 11388552 ~ 11441926 (-)

Expression


Co-expression Network