G233939



Basic Information


Item Value
gene id G233939
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10915974 ~ 10923816 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU317654
GATCAAATATGATATCCCTTCTAAAGGCTTTGAAAGTGTCCACTCTGTTTTAatgtgactgctgctgctgacatcGACAGGGACAGAGACAGGGACCTCAGTTTTCTCACGTTTATACCAGGAGACTGTCAGTGGGGAATTGTTGCAGAAAGTAACTGGGCAGTTAATCCGAAGGTCTCCTCCAAGGACAGCTTCATGAACCGTGCCGCGACGTACTCTAATTTCTATGTCGCAAGTTGAATCCGTACCTGCAAaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU317654 True 257 lncRNA 0.46 3 10915974 10923816

Neighbor


gene id symbol gene type direction distance location
LOC120554111 u2af1,LOC102219527,LOC105917412,LOC103389252,LOC107380862,LOC101158751 coding downstream 16314 10885752 ~ 10899660 (-)
LOC120554104 NA coding downstream 48471 10854723 ~ 10867503 (-)
LOC120554097 LOC100699868,LOC108246800,LOC102211082,LOC101482602,LOC102799187,LOC106525709 coding downstream 130121 10784874 ~ 10785853 (-)
LOC120554100 LOC103371276,LOC104950903,LOC100700136 coding downstream 133446 10780954 ~ 10782528 (-)
LOC120554102 LOC100700411,LOC102798594,LOC101483188,LOC101163295,LOC107380935 coding downstream 139099 10775958 ~ 10776875 (-)
LOC120554115 NA coding upstream 7464 10931280 ~ 10947502 (-)
LOC120554116 NA coding upstream 24505 10948321 ~ 10980875 (-)
LOC120554119 NA coding upstream 43319 10967135 ~ 10989049 (-)
LOC120554120 NA coding upstream 66733 10990549 ~ 10995360 (-)
LOC120554123 NA coding upstream 87416 11011232 ~ 11013638 (-)
LOC120554109 NA non-coding downstream 67619 10837792 ~ 10848355 (-)
G233918 NA non-coding downstream 84844 10829346 ~ 10831130 (-)
LOC120554110 NA non-coding downstream 85714 10824907 ~ 10830260 (-)
G233913 NA non-coding downstream 91118 10818253 ~ 10824856 (-)
G233878 LOC101482024,LOC102799766,LOC102210491,LOC100699157,LOC103371275,LOC103151957 non-coding downstream 124210 10790360 ~ 10791764 (-)
LOC120554121 NA non-coding upstream 34094 10957910 ~ 10958290 (-)
G234024 NA non-coding upstream 117370 11041186 ~ 11094182 (-)
G234026 NA non-coding upstream 136995 11060811 ~ 11083168 (-)
G234032 NA non-coding upstream 228026 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 360976 11284792 ~ 11285090 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 390889 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 528041 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 643115 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 739164 10152861 ~ 10176810 (-)
G233644 NA other downstream 873568 9965692 ~ 10042406 (-)
G233954 NA other upstream 24652 10948468 ~ 10969110 (-)
LOC120554127 NA other upstream 113539 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 212811 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 464736 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 535121 11458937 ~ 11489477 (-)

Expression



Co-expression Network