igfbp5a (igfbp5,LOC103371819,LOC104928322,LOC101465019)


Basic Information

Item Value
gene id igfbp5a
gene name igfbp5,LOC103371819,LOC104928322,LOC101465019
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11524382 ~ 11538321 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU317991
GTATTGCTAAATTTCTTTTGCGAAATTCTGAGACAAGACATATTTTCAATGTGGCtaaaaaacatcaacatttgttttcatttttgtcaTAGTGGTGATCAAGGAGACACCATTGAAGAGTGAGTCAGTTCTCGTCTCAAGTAGCAATGTTTTGCTAATTGTTAATCATAGGAATGACATTCTGATGTAAAaggtatttttttatgtatcaaATAATGGCCATTTAATCCAGCCCGCGACCTACTGTCACTGAACACTTTCCCAAATTAAGGCTACTTTGGCAAGCAGGAAAAGGGGGGAAGGTTCTGCAGGATTCCTGTAGGAGGCTGGGTATATCATTTTGTCATCAGATTGGAGAAACCAACCCATCAGTGGGCAGGAGATAGACAGAGTCAGCTGGCAGCCATTTCATATGCCATAGCCATGTCAGCATGATAGCTATCATTGTTTGTTCAGCATAGATTCACAAAATCATTGGCCTGTTTTCACTAATTGGAGCCAAATCTATAGACCTAGAGTTAAAAGAAGCCTACacacttaaaggaatagtttggcaATTTAGGAGTGTAGGAATGTTAGTTAGTTTAATCCGTCAAAAAGACTTAAAAACATCAGTTTGCCTTTTTATGTGGGTTTTGTgtgctggactatttcttggctttGACCTTTTTAActtaattaacttttttgagtctttttggctggttgcctggcaaacGCTGAGagccaagaaatgaaaacctatGCTCAAAACTCAAGGAAATTCATTCAAAGTATGCTATGTTTTTGCCAGTTAGAGATGATTATTTTCTACATCACAATGGGACGACATTCGATCACCCAGCAGCACTCATAAACAAACTTGTACTGTAAAAGGTTAGTTATTTGACACTCTGTCTCCTTTTTAAAGGCCTTTTTCAAGTCTAGACAAATGAGTCCACTGTTTGTAAAtgtatgtacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtaatgcTCCtgagtgtgtctgtatgtatgtgtactgtactgtactgtactgtttgTGCCATGCCCTTATACGTAGTTCTCGACTACAAGAAGCTCTGGTTTAAATTCTCACAAGCCTCGAGCTACTGTCCGACAAATGTGGTGCTGTGCATTTCCCTTCGCAGACAAATAGTATGCAAAGGCCCCGCAGTGTTTATGTTTCCATGTGTAGGGTCTTTACTGCCGCCAAACAGGCAAATCTGTCGATGACTTGCTCTCAGGGTTTACTGGGTCCTTTATCCTGCAAAGAGCAAGGTCGCTGAGTTTCTATGTAAATTCAAGTGCCTTCTGCCCCACACCACTTTGAATTTTCATTTGCATGTGGACCCATTGTGTGGTTGAATGAGGGACACTCGAGCACAAAGGAGGAAAACAATTTTGGTTGTGGATGTAGTCCGATTGTtttgtctgatttatttttttccgtTGGTTGCTGACAAAGATTATCATGATCTCCCAGGCAAGCACTGCTGAACGTACAATGACAGAGAACTTTTGTTCTATAGTTCAAAATTTGCttaagatcctttttttgtttttgttataatCTTATAGTTCATTTAATGACTTTGTAATGTCAGACATTTTTAATTAGAGCACTGACAGAGGCTCATCAGCCAATTCTTCCCGGTGAAACACCTCTCTCATGGTTTTGATTCTAgcacacatgtaaacacaacAACACGGTGACACTTTAAAACATTTCAGAatctcagttaaaaaaaaaaagattaatgtGAACATTATGGTGAAATATTTATCAGGTGTGTAATTGATGTACTCGACTTATTTTGTAATGGC
>XM_039792847.1
AACGTTGTTTGACATACCCATCGTTGTAGGCTTCGCCTCTGGccgtttcttttttaaaaggcaAGCTCAAAGCCACAGATTATACATTTCGCTCCCAAACCGTGCTGGTAAAATAACCTACGGAGAGAGCAAACAGCGGGAATCAGGCTTTTCAGCTCTCATTTGGAGACGAACAGCTTGCGCGTAAACGGCACCGGGCATCACTGAACGGAGAGATCCGAGGCGTCGGgatatttttgtttcttttttaatttatttgtgaCTGCGGGTTTGAAGGACAGCGCAAGGGGAGCAGAGTGACTGTGCCTTTGTGGATTGCGAGCGTAGGTGACATTCGGGACTTGAGCGCGCAAGGCACCTGTGGATGAAACACCCCCTCTGGTGTTTTGACTCAAATCGTTCGCAAAGAAAGGATTCACCTCAAGATATAATTGCTAATCGTTGCGGTTTCGATCAAACAGCCTGCAGTTTAGACAAGAAGCGCGCCATGCTGTTGAGTGTTTCCTTCCTGGTGCTTCCCCTGCTGCTGAGCATAACCGGCTGCGGCTCGTCGTACGTGCCGTGCCAGCCGTGCGATGAGAAGGCCCTGTCCATGTGTCCGCCGGTGCCGGTGGGTTGTCAGCTGGTGAAGGAGCCCGGCTGCGGCTGCTGCCTGACGTGCGCGCTCGAAGACGGCCAGCCGTGCGGCGTGTACACCGGGCCGTGCACGCGCGGGCTTCGCTGCCTGCCCAAGAATAGCGAGGAGAAGCCGCTGCACGCGCTCCTGCACGGCCGGGGGGTGTGCAGGAACGAGAAGTTGTACAAACTGCTGTATTCGTCCAAAGACGGAGAATCTCATGATGGCGCCATGTTACGCATCCCAGAGTCAATGCTGCCCCAAACCAAGGTGCCCATATACGGAGGAGAACACATCAGCAGTCTCAAGGCCCAGGCCATGAAGCAGGCCAAGGACCGCAAGAAGCAGTTGGCCAGGCCGGGACACGCAAGCAATCTGAACTTTCCCCCGCTCAGCCTGGATAAACTGGAGCCTGAGTTTGGCCCCTGCAGAAGAAAACTGGATGATCTCATTCAAAGCATGAAGGACACTTCTAGGgtctttgctctctctctgtacaTCCCCAACTGTGACAAGAAGGGCTTCTTCAAACGCAAACAGTGTAAGCCATCCCGTGGTCGGAGGAGGGGGATCTGCTGGTGCGTCGACCGGTTTGGCGCAGCAATCCCCGGCAGCAACTATGCCGGAGGAAACCTGCAGTGCAAAGATTtcgacagcagcagcaacagcaacgaATGAGAGTGTACTCGTTGAGCCCTGCTTCTCTTAAAAACCTGCCAATCAAGCTAGCACACTTCACGACTGCCAATCAGGAAAATATGGCACAAATACTTATATATATGGTCGAGTGTgatggactgttttttttttttttctttcaaaaggGAGCTGTACTGAAGAGCTTGCGTAAGTGAAAATCTTCAAATGTAACTGTGGCTCCCTGCTGACCGTGTACTATGTTTGAGGTTAGCTAACACCTTACCTCTTTATACCCATATATAATAgaggattatatatatatacagtatatatatatgtatgatatTGATAATATGTTGTGTATTGAAGTGTATTGCTAAATTTCTTTTGCGAAATTCTGAGACAAGACATATTTTCAATGTGGCtaaaaaacatcaacatttgttttcatttttgtcaTAGTGGTGATCAAGGAGACACCATTGAAGAGTGAGTCAGTTCTCGTCTCAAGTAGCAATGTTTTGCTAATTGTTAATCATAGGAATGACATTCTGATGTAAAaggtatttttttatgtatcaaATAATGGCCATTTAATCCAGCCCGCGACCTACTGTCACTGAACACTTTCCCAAATTAAGGCTACTTTGGCAAGCAGGAAAAGGGGGGAAGGTTCTGCAGGATTCCTGTAGGAGGCTGGGTATATCATTTTGTCATCAGATTGGAGAAACCAACCCATCAGTGGGCAGGAGATAGACAGAGTCAGCTGGCAGCCATTTCATATGCCATAGCCATGTCAGCATGATAGCTATCATTGTTTGTTCAGCATAGATTCACAAAATCATTGGCCTGTTTTCACTAATTGGAGCCAAATCTATAGACCTAGAGTTAAAAGAAGCCTACacacttaaaggaatagtttggcaATTTAGGAGTGTAGGAATGTTAGTTAGTTTAATCCGTCAAAAAGACTTAAAAACATCAGTTTGCCTTTTTATGTGGGTTTTGTgtgctggactatttcttggctttGACCTTTTTAActtaattaacttttttgagtctttttggctggttgcctggcaaacGCTGAGagccaagaaatgaaaacctatGCTCAAAACTCAAGGAAATTCATTCAAAGTATGCTATGTTTTTGCCAGTTAGAGATGATTATTTTCTACATCACAATGGGACGACATTCGATCACCCAGCAGCACTCATAAACAAACTTGTACTGTAAAAGGTTAGTTATTTGACACTCTGTCTCCTTTTTAAAGGCCTTTTTCAAGTCTAGACAAATGAGTCCACTGTTTGTAAAtgtatgtacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtaatgcTCCtgagtgtgtctgtatgtatgtgtactgtactgtactgtactgtttgTGCCATGCCCTTATACGTAGTTCTCGACTACAAGAAGCTCTGGTTTAAATTCTCACAAGCCTCGAGCTACTGTCCGACAAATGTGGTGCTGTGCATTTCCCTTCGCAGACAAATAGTATGCAAAGGCCCCGCAGTGTTTATGTTTCCATGTGTAGGGTCTTTACTGCCGCCAAACAGGCAAATCTGTCGATGACTTGCTCTCAGGGTTTACTGGGTCCTTTATCCTGCAAAGAGCAAGGTCGCTGAGTTTCTATGTAAATTCAAGTGCCTTCTGCCCCACACCACTTTGAATTTTCATTTGCATGTGGACCCATTGTGTGGTTGAATGAGGGACACTCGAGCACAAAGGAGGAAAACAATTTTGGTTGTGGATGTAGTCCGATTGTtttgtctgatttatttttttccgtTGGTTGCTGACAAAGATTATCATGATCTCCCAGGCAAGCACTGCTGAACGTACAATGACAGAGAACTTTTGTTCTATAGTTCAAAATTTGCttaagatcctttttttgtttttgttataatCTTATAGTTCATTTAATGACTTTGTAATGTCAGACATTTTTAATTAGAGCACTGACAGAGGCTCATCAGCCAATTCTTCCCGGTGAAACACCTCTCTCATGGTTTTGATTCTAgcacacatgtaaacacaacAACACGGTGACACTTTAAAACATTTCAGAatctcagttaaaaaaaaaaagattaatgtGAACATTATGGTGAAATATTTATCAGGTGTGTAATTGATGTACTCGACTTATTTTGTAATGGCAAATCACTATTTAAATAAAGTGCATGTACTCACAAAAAACCATATATGCACATTTGTCTTCAA

Function

symbol description
igfbp5 Enables insulin-like growth factor I binding activity. Involved in several processes, including cellular response to cAMP; regulation of smooth muscle cell migration; and regulation of smooth muscle cell proliferation. Part of insulin-like growth factor ternary complex. Biomarker of pulmonary fibrosis.

NR:

description
PREDICTED: insulin-like growth factor-binding protein 5

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317991 False 1832 lncRNA 0.39 2 11524445 11526302
XM_039792847.1 True 3546 mRNA 0.44 4 11524382 11538321

Neighbor

gene id symbol gene type direction distance location
LOC120554150 NA coding downstream 21901 11470451 ~ 11502481 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding downstream 137130 11370953 ~ 11387252 (-)
LOC120554143 LOC104935050 coding downstream 201296 11314682 ~ 11323086 (-)
LOC120554144 NA coding downstream 210238 11306761 ~ 11314144 (-)
arpc2 arpc2 coding downstream 249400 11265556 ~ 11274982 (-)
tns1a NA coding upstream 29250 11567571 ~ 11684433 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding upstream 170006 11708327 ~ 11715150 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding upstream 179860 11718181 ~ 11724139 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding upstream 301396 11839717 ~ 11849823 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 830075 12368396 ~ 12383014 (-)
G234153 NA non-coding downstream 178506 11343961 ~ 11345876 (-)
G234152 NA non-coding downstream 182543 11336610 ~ 11341839 (-)
G234080 NA non-coding downstream 190293 11333367 ~ 11334089 (-)
G234078 NA non-coding downstream 191822 11332281 ~ 11332560 (-)
G234063 NA non-coding downstream 217679 11305611 ~ 11306703 (-)
LOC120554171 NA non-coding upstream 81513 11619834 ~ 11620856 (-)
LOC120554169 NA non-coding upstream 82548 11620869 ~ 11621353 (-)
G234181 NA non-coding upstream 146301 11684622 ~ 11685167 (-)
G234194 NA non-coding upstream 260242 11798563 ~ 11822502 (-)
G234225 NA non-coding upstream 583919 12122240 ~ 12201428 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 34905 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 82456 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 385137 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 477423 11037355 ~ 11046959 (-)
G233954 NA other downstream 555272 10948468 ~ 10969110 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 740198 12278519 ~ 12293143 (-)
G234405 NA other upstream 1414769 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 2655991 14194312 ~ 14290043 (-)
G234898 NA other upstream 3309513 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 3427995 14966316 ~ 15013814 (-)

Expression


Co-expression Network