G234238 (myl1,LOC101075868,LOC104929359)


Basic Information

Item Value
gene id G234238
gene name myl1,LOC101075868,LOC104929359
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 12200076 ~ 12270069 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU318086
AGCCACAATTCAAACCCTAAATTGTTCCAGGTTTTACCGTATTTGCAGTTAAATAGCGTTGAATAAAGAATTTACCATTTGTCAGGTTTTGTGGAACTCAGTTAGCAAtgtttatttctgttatttttatgaATATGTTCAGTTCATATAAAGCCAGAATAAAAAGTAATACAGGGAAGGTTGCAGAGTGTACATTAGAACTTGGCTGCACTCTCTCTATCCACAGCACCGATTCCCGGTGAAGAGTGTTCACCTGTGGCCTTGCGTCTAGCAGAGCCGTGAAGCAGAGCGGGCCTAGGATGTCTGGCTGCTGATTTGGCTACACTCTTTCGAGATGGAGAACGACATTGGAGGGCTGAAACCTTATTCAGGTCAGCCCTCCTCACAGCTACAGcaaagaggagagacaggatTATACCAATATGCAAACCTCAGTTAAATGTACTGCAGAGAGGCAAATCTGTACTTAACAAGTTACACAAGTGACATTGCTATTGGATTCGCTAGGGAATAAAATGTGTAAatgaaaagatatataacaattTGTTCTAAGCTAAACAACACTTCGTGAATACAGAATCGgaaccttttttcttcttcatctcctCTCTTGGTGGATGGTGGCCAGTTACTTTGCGGGACACTTTACTCTCAGTGATGCCAGGGTGGCCCCTTCCTCTGCCAGGGGCCCGTTTAGCGGGTCTGTCCACCACAGGTGTACTAGTAGGACGCTGGACCTGAGGAAGGGCTTCAATTTGCTCAGTCATGATACTTTTGTCATCATCTTGTGAGTCCATCCAGCCACTGTCTGTATCTAGGATAGAGACGTCCATGGTGGTTTCATCATTAGCTGCCTGACTGGTCTGGTGCAGTACATCAGAGGTCTCTTCCACCTCGTGTTCACCcatcctctcctccccctcatCCTCCATCGTTTTCTTCGGTTTCTCTTCACGTACCACATCAGAACCAACTTCTTCCACTTGCTCCTCTCCTGTTGGGTCTTTCTCTACCACCTCTTTAGTCCCTTCATCCCTATttatttgtgtatgttttaCTTTATCCTCACCTATCCCATCATCTCTGCCACCTTCATCCAGTTGCTGTGGGAGGTCATGGTCGGAGCATAGAGGCAAGTGCGAACTGTCTGTCACAGGCTCCCCATTATCACTGCTTTGCACACTGTGACTACATTCTTCTGCTCCAGACTTGGGATATTCTTCTACCATCTGATCGCCTACCGTCAGCCTCCCCCTAATTAGACTCTCAGGGACTTCAGCTTCTTCAATTACCTCTTGAGGCTCTTCGGCAATCTCAATTTCATCCTCTTCATCTGCTTCTTCCTCTACTTGTGCTTGAGGTATAATGATGACTGGGGAGGATATTTGTGGCATTTTTGGAGCAACCTTATCCAGAGTCACCTCCTGTAACTGGATTTTGGCATCTTTCTCATCTAAGGGCTTTCCGGTGCTTAAATCCTGAACATCTTCTGGGGTCTCTTGCTTTTCTATTCTTTCTAATCTTGTAGGTATCCCATTCTCACTTTCAATTTTCTTGTCATCTTTTTCTTGGATGTACGCTGGAAAAGTTTATTCTGAAATGAACAGAGTGACGATAAACAAAACCTTTTCAGGGAAGTGGGAGACTTTTGGCTGTCTATCCACGACCGTTCTCCAGCACCTTTGGCACTGCTGGGCCAGTGATGGCGTGACTGAATGAGGTGGCGGTGGGAGGTGAGGGATCTACCCTCACTTGATGAGCGGTCACCCCTTCTCCCCCGTTCCTCACCCCATTGCGGCAAGTGGAGACGCGCCCCCGGGTGGAGTAGAGGCCATGCGATGTGCGGTCTACAATGGAGAGTTGATGGTGGTGTCCCGAGAGAGGAGGGTTTTTGGGACGAAATGgaaaggaaaacaaaataaacaacaagaTGGGTTTGCTTCAACATCCCTTGTACATAGTCCTTGTCTTTCCTTGGTTGGTCTTTGGTACAGTGTAGATGTTTAGAACACTGTCAGGCTGTCTGTAGGCGAGCTACAGTTTCTTCAGCACTCCTACTGCTGGCCTCTTACACAGACATGATGTGCTTGACGAAACCTCATAGTGGATGCTGCCGTTCTCGTCCTCCTGGCCGGTCATAAGGGCCTCAATCTCTGGCTCAGACATCTTCTCTCCCAGGGTGGACAGCACGATACGCAGCTCAGCGCCCATGACTGTGCCGTTGCCCTCTTTGTCGAAGACGCGGAGACCCTCAACGTAGTCGTCGTAGCTACCCTTTGGCGCGCCGTCAACCTGCTTCAGCATGGGCAGGAAAGCCTCGAAGTTGATCCTCTTGTTGGCCATggagacagagagac

Function

symbol description
myl1 Predicted to enable calcium ion binding activity. Acts upstream of or within skeletal muscle tissue development. Is expressed in adaxial cell; fin; musculature system; and somite. Orthologous to human MYL1 (myosin light chain 1).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: myosin light chain 3, skeletal muscle isoform-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318086 True 2357 lncRNA 0.48 6 12200076 12270069

Neighbor

gene id symbol gene type direction distance location
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding downstream 350253 11839717 ~ 11849823 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 475937 11718181 ~ 11724139 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding downstream 484926 11708327 ~ 11715150 (-)
tns1a NA coding downstream 515643 11567571 ~ 11684433 (-)
LOC120554150 NA coding downstream 697595 11470451 ~ 11502481 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 98327 12368396 ~ 12383014 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 332175 12602244 ~ 12644357 (-)
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding upstream 527775 12797844 ~ 12885098 (-)
LOC120554312 NA coding upstream 681352 12951421 ~ 12954215 (-)
LOC120554795 NA coding upstream 684037 12954106 ~ 12959563 (-)
G234194 NA non-coding downstream 377574 11798563 ~ 11822502 (-)
G234181 NA non-coding downstream 514909 11684622 ~ 11685167 (-)
LOC120554169 NA non-coding downstream 578723 11620869 ~ 11621353 (-)
LOC120554171 NA non-coding downstream 579220 11619834 ~ 11620856 (-)
G234153 NA non-coding downstream 854200 11343961 ~ 11345876 (-)
G234311 NA non-coding upstream 88694 12358763 ~ 12361269 (-)
LOC120554060 NA non-coding upstream 132920 12402989 ~ 12424938 (-)
G234328 NA non-coding upstream 162778 12432847 ~ 12434743 (-)
G234330 NA non-coding upstream 166927 12436996 ~ 12487330 (-)
G234333 NA non-coding upstream 217836 12487905 ~ 12489008 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 661755 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 710599 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 758150 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 1060831 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 1153117 11037355 ~ 11046959 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 8450 12278519 ~ 12293143 (-)
G234405 NA other upstream 683021 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1924243 14194312 ~ 14290043 (-)
G234898 NA other upstream 2577765 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 2696247 14966316 ~ 15013814 (-)

Expression


Co-expression Network