G234240


Basic Information

Item Value
gene id G234240
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 12210934 ~ 12212609 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU318091
CCCTGGGAGCCCTGGGATCCCTGGGAGCGCTGGGAGCACTGGGAGCCCTGGGAGCCCTGGACCTGTGCCATGCTTCCACTTACTCCTTGTGGTGTGGAATCACTTCCTCTTGATAGAAGCGGCGGACGCTTTGCCTGAAGATATCATGGTCCTCGTTGAAGATCCGGCGGGTCCCGATGTCCATCAGTGTCTTGGCGCTGGAGGTCTCTGGGCGGGTCGAGGGGACTTGCTGCCCGAGCTCCTGGGCCTGACTGTGCAGCCTGCAGCAGCCACGGAGACCGCCTGTCCTCGCCCAGAGACATTTTTCAGCCCAGAAAGACAAGCTTTGctaacttttttaacaaacatcCTCGACAAAGGCAGGCAAACTCACAGACTCACACGGACAAACGTACAAGTGTAAACTGTAGGGTACAAAGATCGTCTGTGTGAGAATCACAAGGGAAGATGGATCACTGTAGTCGGTCACTGGCTACTCCTCTCAGCAGTACGTTTTACCATAACCGTATGCTTGCATGTAGCAATTAAACACGTTGTTAGTACAGTGCGTCGATACTATCGTCCATTTGTGTACTGTTTTTGTTCAAACGAACTTGAAATGTGACTTGGAAGGAGGAGAAGGTTTAGGAGAAGGTTTGTCCATGACAACAGCACACGTGTGGTACCTCCCGCCGATTCCTTCTCTCTGCGCAGAtagctttcttcttcttctacaccCTGTAGACTCACTTAACTCCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318091 True 740 lncRNA 0.52 2 12210934 12212609

Neighbor

gene id symbol gene type direction distance location
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding downstream 361111 11839717 ~ 11849823 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 486795 11718181 ~ 11724139 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding downstream 495784 11708327 ~ 11715150 (-)
tns1a NA coding downstream 526501 11567571 ~ 11684433 (-)
LOC120554150 NA coding downstream 708453 11470451 ~ 11502481 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 155787 12368396 ~ 12383014 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 389635 12602244 ~ 12644357 (-)
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding upstream 585235 12797844 ~ 12885098 (-)
LOC120554312 NA coding upstream 738812 12951421 ~ 12954215 (-)
LOC120554795 NA coding upstream 741497 12954106 ~ 12959563 (-)
G234225 NA non-coding downstream 9506 12122240 ~ 12201428 (-)
G234194 NA non-coding downstream 388432 11798563 ~ 11822502 (-)
G234181 NA non-coding downstream 525767 11684622 ~ 11685167 (-)
LOC120554169 NA non-coding downstream 589581 11620869 ~ 11621353 (-)
LOC120554171 NA non-coding downstream 590078 11619834 ~ 11620856 (-)
G234311 NA non-coding upstream 146154 12358763 ~ 12361269 (-)
LOC120554060 NA non-coding upstream 190380 12402989 ~ 12424938 (-)
G234328 NA non-coding upstream 220238 12432847 ~ 12434743 (-)
G234330 NA non-coding upstream 224387 12436996 ~ 12487330 (-)
G234333 NA non-coding upstream 275296 12487905 ~ 12489008 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 672613 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 721457 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 769008 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 1071689 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 1163975 11037355 ~ 11046959 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 65910 12278519 ~ 12293143 (-)
G234405 NA other upstream 740481 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1981703 14194312 ~ 14290043 (-)
G234898 NA other upstream 2635225 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 2753707 14966316 ~ 15013814 (-)

Expression


Co-expression Network