G234478


Basic Information

Item Value
gene id G234478
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 13161732 ~ 13162096 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU318408
tgacgtttccatgttctcattctgtttacgccaaattctgactctaccatctgaatatctcaacagaaatcgagactcatcagaccaggcaacatttttacagtcttcaactgtccaattttggtgagctcgtgcaaattgtagcctcgttttcctatttttagtggagatgagtggtccccagtggggtcttctgctggtgtagcccatccgcctcaaggttgtgcgtgttgtggcttcacaaatgctttgctgcatacctcggttgtaacgagtggttatttgagtcaaagttgatcttctatcagctggaatcagtcggcccattctcctctgacctcaacaaggcattttcgccccccagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318408 True 365 lncRNA 0.47 1 13161732 13162096

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_27 NA coding downstream 49504 13112158 ~ 13112228 (-)
trnad-guc_30 NA coding downstream 105045 13056616 ~ 13056687 (-)
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding downstream 113136 13021048 ~ 13048596 (-)
mtrf1 mtrf1,LOC104961503 coding downstream 165737 12992838 ~ 12995995 (-)
trnae-uuc_66 NA coding downstream 175844 12985817 ~ 12985888 (-)
LOC120554566 NA coding upstream 544154 13706250 ~ 13711834 (-)
hecw2b hecw2 coding upstream 635336 13797432 ~ 14008423 (-)
LOC120554288 NA coding upstream 817955 13980051 ~ 13981370 (-)
gtf3c3 gtf3c3 coding upstream 848169 14010265 ~ 14087482 (-)
LOC120554388 NA coding upstream 1128577 14290673 ~ 14299690 (-)
G234434 NA non-coding downstream 170294 12988373 ~ 12991438 (-)
G234375 NA non-coding downstream 375789 12783991 ~ 12785943 (-)
G234373 NA non-coding downstream 381572 12779586 ~ 12780160 (-)
G234333 NA non-coding downstream 672724 12487905 ~ 12489008 (-)
G234330 NA non-coding downstream 674402 12436996 ~ 12487330 (-)
G234490 NA non-coding upstream 37882 13199978 ~ 13200294 (-)
G234491 NA non-coding upstream 40826 13202922 ~ 13205960 (-)
G234523 NA non-coding upstream 268885 13430981 ~ 13439811 (-)
G234526 dmd non-coding upstream 324871 13486967 ~ 13497867 (-)
G234527 LOC104966508 non-coding upstream 335992 13498088 ~ 13504486 (-)
G234405 NA other downstream 207607 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 868589 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 1623411 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 1672255 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 1719806 11388552 ~ 11441926 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1032216 14194312 ~ 14290043 (-)
G234898 NA other upstream 1685738 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 1804220 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3086598 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 3163997 16326093 ~ 16352877 (-)

Expression


Co-expression Network