G234491


Basic Information

Item Value
gene id G234491
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 13202922 ~ 13205960 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU318421
TTTTGTTCAGTGCTTTAATGTGCCAACGTACAAAGAGATAAATGCTTATTACTGACAGCTCTACAATGGCATCTAAAACATgccaacacacatgcacacacactcgttCTCTATTTGTCTAACACACTCTTCCTCTGTCAttcagacacacattcatacacacttCCTAAATCCCTATGCACATCATTAGACAGTGTTTCTCTCCAGTCTACTGGGAGATGAGGCATAAAACAGAGCTGTCTCTTGTTTGCGAGCCTCTACTTTTCATCAGTAAATTAATAACCAAACAAATGCTAAAATCTACGAGTCAGACTTGGGCTAAAACATACAAGGAACCAgcagtacatttcatttgtacagagagtctggccactgtccattgacaagtgttaacttccttgaaggcgggtactccgttgaagtttaaaatgattggatctgcccagagtcactctggatctgccataaccaatcgcttttcccgaaccccgtggggaagAGGGACATatcatcatggccaccaacacaactcagcaaagattgttcttgctcgggcttttggatattcggcagcgttgccacaacggaccgaatggcttcgctcgcatctttctccgccaccATTACAGAACTACAACTCTAGCGCAcggcctcaacgtcatcgttctcagcctgtctctctgttcACTGATTTGAGACAGGTTCGCCAAAAATttggctggagaaaacccaagactataccgCGAACCCAGAAAATTTAGCGTAAGTacataggagggcggagccaggctagggTCAGACACTATGGAATCAGAAATACCGTAACGTATATAACGTATTAATAACGTATTAAAGAATAGTTGTGTTTTTGTAGCAAGCTCATTTAGTTCCCCATATAAACTACACTGAGGTGCCTTACACAAATAATCGTATTTACCCAGAACCACATTGAAGTGCTTCATTAAAAATCAAAGCATGTAGGTCATTTTTTCGAAACTGGTGCAACCATATTTGCCTTGTCATTTAGAATCAGAGACTCATAATTAAAACTGACGTGACATTGATTTCAGCTCCTAATTAAAAAATCAAAACACAGCGACTTTAACTGCATCTGCTCGTTCCTGAAGGCAGCAGCTATGAGAAGTTAGGGTAGGTTTGTTTTATGTATGTAGTGTTGTCACATTGAATCTTGGATAAAATATGTACTAATAACAGCAGCTGTACAATGTTAAACTACCCGGCAAAATAAAGCTGTAAATCTTTGATCAGAAAGGGGATTTATCTCCTTTAgagtgtttatgtgtctgaCGGGTAAATTAAGAATAAGGGTGCTGTAACACCACGCTGTAAATCAACAACATTTTCAGTACGTTTCAGAGTTGCTGCAGACAAATATTTtgcacaaaacaaatacaaaccaatgttagttttttttagtttattatTGTCATTTAGTCCTTCCATTATAATAATGGATATTGGAAATGATTCATGTATATTTTAACCCAGATCTGTTGCAGTGTTAGTGCCTACGGCTCCTCTACACCACCAAAGCACAGAGACGTTTCTAGGTAGCAAAAACACCCTCACTAAGCTGTGATCATACAGTATTAAATACAGTAGCGGCCATATCAAATATCATACTGGTGGTAATTATCTCTATTACAGCACTTCCTCATTGTGTCAAGACTTCTGTCTAACTCTGTCAGCATGGAGTAAAAACACACAGGTGACACAAAGTGCTTCGTCCATGACCTGACAGAAAATCTGGTGAACCAACAAAGCTAAACACTGATTAACCAGAGCCCTACCACTGTACACGGTGAGCTGTGACATCTTTCAAACTGATAAATTACTAAAGAGTAGGGTCACATGCTTAAAAAAGCACCCGCTGACCCATATAGCTGGTATGACTAATGGAATAATGGCCGTAACACTGAGTGCTGTTTCTGCTTTTACTCAGGGCCAAATTAAAAGATGGGTAAACTGTGACATCCAGTCACTAAAAAAACCCACATAAAAGCATTGAAGGTCAGGATTTTTGTCCGCCTCAGAAGACTCTACTTTTATATAACATCAGTTCAATACTAACTTCCTAGAATATACACTGTGAATTTACAACATGACGTTTATATCAGCCTGAAATGGCTTGTAAAGTGAGATTAAGTGACTTTAGTCTCCACCACATCCTGCACACAAGTTTATTGTTTAGTAACGCTTTACATTGCAGCCTAAAAATTACAGTGTAAATATTTTGGACATGCAGGGTACCAATGACAATatgaatataataaaatatatgtgtTTAGGGGTTACCTACTATAGAAAGTGTTCTAGGTCTTTCTCCAACATCAGTTTGTTGACCATATAAATTCTACATTGGATCCCTAAACTATTACTCTTCTAGTATTTATTCATTACACTATATAGTGGTATACAGGTATATTGGTACACCTGTCTTCCTGGGCTTAAATTAATAGTGTTCTTTCCCAATGGCAACAATAATTGATTAAAAGAATAGTtggacatttttggaaatactcttttttgctttctttcccAGAGTTAgttcgataccactctcatgtctatGCCAACAGCTAGTTTGACTGTACGGATTAAACAATCAAAATGcggtaatgtttttattaatgaaCTTTCCAAGTGCTGGTAGGTAGATTTTGAAATTCGGACAGAACCAGGCTGTCTTTGTCCCAtttccagtcttcatgctaagctaagctaaccagttGATGACTGTAGTTTAATATTTAGTGTACAGATATGACAGTTGTATCAGTCTTAACAACTAACTCTTGAAAAGAAAgcacattttccaaactattcctttaaaggtgcagtaggtaagacttataaaaaggtgcagtaggtaagaattataaaactaactttctgtcatattttctgaaactgaccctatgctcaagtagaactacatgaagcaggtcatttagaaaaaaaagatcgggctcctctggcaccacctacagcctgtagtgcgatttgcaaaaatccacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU318421 True 3039 lncRNA 0.39 1 13202922 13205960

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_27 NA coding downstream 90694 13112158 ~ 13112228 (-)
trnad-guc_30 NA coding downstream 146235 13056616 ~ 13056687 (-)
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding downstream 154326 13021048 ~ 13048596 (-)
mtrf1 mtrf1,LOC104961503 coding downstream 206927 12992838 ~ 12995995 (-)
trnae-uuc_66 NA coding downstream 217034 12985817 ~ 12985888 (-)
LOC120554566 NA coding upstream 500290 13706250 ~ 13711834 (-)
hecw2b hecw2 coding upstream 591472 13797432 ~ 14008423 (-)
LOC120554288 NA coding upstream 774091 13980051 ~ 13981370 (-)
gtf3c3 gtf3c3 coding upstream 804305 14010265 ~ 14087482 (-)
LOC120554388 NA coding upstream 1084713 14290673 ~ 14299690 (-)
G234490 NA non-coding downstream 2628 13199978 ~ 13200294 (-)
G234478 NA non-coding downstream 40826 13161732 ~ 13162096 (-)
G234434 NA non-coding downstream 211484 12988373 ~ 12991438 (-)
G234375 NA non-coding downstream 416979 12783991 ~ 12785943 (-)
G234373 NA non-coding downstream 422762 12779586 ~ 12780160 (-)
G234523 NA non-coding upstream 225021 13430981 ~ 13439811 (-)
G234526 dmd non-coding upstream 281007 13486967 ~ 13497867 (-)
G234527 LOC104966508 non-coding upstream 292128 13498088 ~ 13504486 (-)
G234586 NA non-coding upstream 604424 13810384 ~ 13813184 (-)
G234638 NA non-coding upstream 883047 14089007 ~ 14089210 (-)
G234405 NA other downstream 248797 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 909779 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 1664601 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 1713445 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 1760996 11388552 ~ 11441926 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 988352 14194312 ~ 14290043 (-)
G234898 NA other upstream 1641874 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 1760356 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3042734 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 3120133 16326093 ~ 16352877 (-)

Expression


Co-expression Network