G235074


Basic Information

Item Value
gene id G235074
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15666872 ~ 15667356 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319121
TGAAAAGATTACCAATTCAATATCATGTCCCTGACTTTCCATCCatcgccatcatcaggtcaaagttTCAGTTTGTCCAAAACTTTGGTTCATGACTTAACTGACATTTATGATAATGATGAGGACTCGTAAGGCTGGGTTTAAAAAGCTAAAATTGTTTTGCAACTAAAAAGATCCCAAATCGACATTTAAATCGTAAATCAATTCGGGAAATCGGTGGCCCTACCCAGCATACTCTGCATTTTAGCATCGTGAGCATGTTAAAATCCAGATGTTAGCATACGACTTGAAACATATCTGTTCATGTATCAAAGTAAAAAGGCGTTATTTGGAAATAACTGTCTCCAGCTCTGAACTTGACACAACAAAATGAAATCATTTTCATCTCATTCTCGGAAAGAAAGAACTTGAAGATGGAAGGAAAGGAGTGTATAAGAGTCTATAAATCAACGTACAGTAAAGTTTATGTAAATACCTGTGTATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319121 True 485 lncRNA 0.36 1 15666872 15667356

Neighbor

gene id symbol gene type direction distance location
LOC120554210 zbed1 coding upstream 1235 15660295 ~ 15665637 (+)
LOC120554262 NA coding upstream 208212 15456557 ~ 15458660 (+)
LOC120554259 NA coding upstream 210735 15450271 ~ 15456137 (+)
LOC120553993 NA coding upstream 294023 15334240 ~ 15372849 (+)
LOC120553992 hps3 coding upstream 381687 15284502 ~ 15285185 (+)
LOC120554235 NA coding downstream 41174 15708530 ~ 15856139 (+)
LOC120554228 NA coding downstream 187212 15854568 ~ 15881314 (+)
trnat-agu_17 NA coding downstream 262938 15930294 ~ 15930367 (+)
trnas-uga_25 NA coding downstream 263467 15930823 ~ 15930904 (+)
trnas-uga_26 NA coding downstream 266279 15933635 ~ 15933716 (+)
G235056 NA non-coding upstream 52319 15614216 ~ 15614553 (+)
LOC120554283 NA non-coding upstream 100309 15563750 ~ 15566563 (+)
LOC120554271 NA non-coding upstream 192865 15468814 ~ 15474007 (+)
LOC120554269 NA non-coding upstream 466131 15197999 ~ 15200741 (+)
G234919 NA non-coding upstream 621352 15045224 ~ 15045520 (+)
LOC120554272 NA non-coding downstream 9621 15676977 ~ 15683490 (+)
G235152 NA non-coding downstream 216407 15883763 ~ 15884010 (+)
LOC120554276 NA non-coding downstream 458105 16125461 ~ 16126791 (+)
G235185 NA non-coding downstream 528206 16195562 ~ 16195700 (+)
G235216 NA non-coding downstream 554064 16221420 ~ 16222735 (+)
LOC120554227 NA other upstream 624428 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 756797 14806527 ~ 14910075 (+)
G234651 NA other upstream 1522002 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 2464060 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 2641352 13002963 ~ 13025520 (+)
LOC120554234 NA other downstream 721341 16388697 ~ 16612671 (+)
trnat-cgu_20 NA other downstream 1089209 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 1093002 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 1094143 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 1095180 16762536 ~ 16762608 (+)

Expression


Co-expression Network