G235152


Basic Information

Item Value
gene id G235152
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15883763 ~ 15884010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319214
agcaaacaaacgaacaggatcaatggagatagattctacccgacctaaaaaaacagttgcgtgaccagagacgtaacaaccccctggtaaatattggagatgtatttgaaagatggagacagcttagatcccaaaaggacgcagaattggcttatttcctcctgaacaggtaagcatagcttcaggctaatttatcacagccactagggacgggcattttaggtcatttcaacatttgtgtactcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319214 True 248 lncRNA 0.42 1 15883763 15884010

Neighbor

gene id symbol gene type direction distance location
LOC120554228 NA coding upstream 2449 15854568 ~ 15881314 (+)
LOC120554235 NA coding upstream 27624 15708530 ~ 15856139 (+)
LOC120554210 zbed1 coding upstream 218126 15660295 ~ 15665637 (+)
LOC120554262 NA coding upstream 425103 15456557 ~ 15458660 (+)
LOC120554259 NA coding upstream 427626 15450271 ~ 15456137 (+)
trnat-agu_17 NA coding downstream 46284 15930294 ~ 15930367 (+)
trnas-uga_25 NA coding downstream 46813 15930823 ~ 15930904 (+)
trnas-uga_26 NA coding downstream 49625 15933635 ~ 15933716 (+)
trnas-uga_27 NA coding downstream 54375 15938385 ~ 15938466 (+)
trnas-uga_28 NA coding downstream 56853 15940863 ~ 15940943 (+)
LOC120554272 NA non-coding upstream 200273 15676977 ~ 15683490 (+)
G235074 NA non-coding upstream 216407 15666872 ~ 15667356 (+)
G235056 NA non-coding upstream 269210 15614216 ~ 15614553 (+)
LOC120554283 NA non-coding upstream 317200 15563750 ~ 15566563 (+)
LOC120554271 NA non-coding upstream 409756 15468814 ~ 15474007 (+)
LOC120554276 NA non-coding downstream 241451 16125461 ~ 16126791 (+)
G235185 NA non-coding downstream 311552 16195562 ~ 16195700 (+)
G235216 NA non-coding downstream 337410 16221420 ~ 16222735 (+)
G235243 NA non-coding downstream 438831 16322841 ~ 16324248 (+)
trnat-agu_42 NA non-coding downstream 622611 16506621 ~ 16506694 (+)
LOC120554227 NA other upstream 841319 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 973688 14806527 ~ 14910075 (+)
G234651 NA other upstream 1738893 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 2680951 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 2858243 13002963 ~ 13025520 (+)
LOC120554234 NA other downstream 504687 16388697 ~ 16612671 (+)
trnat-cgu_20 NA other downstream 872555 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 876348 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 877489 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 878526 16762536 ~ 16762608 (+)

Expression


Co-expression Network