G235284


Basic Information

Item Value
gene id G235284
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16594198 ~ 16594849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319398
gctcatctaaatattcatgaccataccatatttggaagaaaagctcttgttacaaatagggccaaaacacagggatgcataagggccaataaaatatcaactgggccattttcagcccaactaatgttacataccccattaggagaccataaggaacagtgtgaaataccctatataatcattctatcacccctttaatagtTAGCAAACCTCCCGTCATACAGCCTTTGACTTGATTGGACATAGAACACGCCGCAAAGGAGACTCAAGTCTTCTTTTAAATGTTCTCGGTCTGGGCCAGGCCATGTGGCCATCTTTCACCCGCACACATCGTTTTTGTCCTTTAGCTTAGATCTTTTAGATGCCATTAGATGTTGCGTTGTTTACTTTTGCTTTATTAATTTTGGGAATAAACGCTATGGAAAATACATGTTGTCTACCTCTCCTGTGACAAGAGCTCAGAAATCTTTTAACTTTTGCTCGCTATTTAGGGTAACCGCGGGGTCTTATGTCTTAAATTCAATATTCTAAAAATAAGGCcttaaaagtcttacatttcgTTTACAAAGGTCTTCAATTATTTTGTGTCCTTTTGTAGGATTAAATAAATACCgtaataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319398 True 621 lncRNA 0.38 2 16594198 16594849

Neighbor

gene id symbol gene type direction distance location
trnas-uga_33 NA coding upstream 92045 16502072 ~ 16502153 (+)
LOC120554222 NA coding upstream 92913 16494132 ~ 16501285 (+)
trnat-ugu_42 NA coding upstream 369371 16224755 ~ 16224827 (+)
LOC120554255 NA coding upstream 373512 16201422 ~ 16220686 (+)
LOC120553997 NA coding upstream 399346 16183840 ~ 16194852 (+)
trnak-cuu_44 NA coding downstream 27834 16622683 ~ 16622755 (+)
trnat-agu_53 NA coding downstream 28154 16623003 ~ 16623076 (+)
LOC120554238 NA coding downstream 48793 16643642 ~ 16658812 (+)
LOC120554253 dhrsx,LOC104961879 coding downstream 64954 16659803 ~ 16674690 (+)
LOC120554242 NA coding downstream 86179 16681028 ~ 16683511 (+)
LOC120554281 NA non-coding upstream 28154 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 70886 16523239 ~ 16523312 (+)
trnak-cuu_43 NA non-coding upstream 71200 16522926 ~ 16522998 (+)
trnat-agu_51 NA non-coding upstream 73803 16520322 ~ 16520395 (+)
trnak-cuu_42 NA non-coding upstream 74128 16519998 ~ 16520070 (+)
G235321 NA non-coding downstream 245337 16840186 ~ 16840829 (+)
G235332 NA non-coding downstream 339950 16934799 ~ 16935666 (+)
LOC120554286 NA non-coding downstream 538267 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 588506 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 718160 17313009 ~ 17313865 (+)
LOC120554227 NA other upstream 1551754 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1684123 14806527 ~ 14910075 (+)
G234651 NA other upstream 2449328 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 3391386 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 3568678 13002963 ~ 13025520 (+)
trnat-cgu_20 NA other downstream 161716 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 165509 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 166650 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 167687 16762536 ~ 16762608 (+)
LOC120554243 NA other downstream 285790 16880639 ~ 16932606 (+)

Expression


Co-expression Network