G235357


Basic Information

Item Value
gene id G235357
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16681727 ~ 16711192 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319479
CAAGTTTcccaattttattttttcctcatgACCGCACGCCGGAGATACGGCACGGTGCCGGAATACTTTAAGCCCTGTGATCTTTATTCATAGAGCACTTCAAAATCCATGCTACAAAGTGttttacaaaacagaaaaataacacGACATGACAGAGCAGTCATAAAAACATCaagattaaaaaatatatatatctaaagACTATTTGGTGTTTAAAACCCTGTACAATGTAAGGAAGTGTAtgtagtaaaacaaaaaaaaaaaaaaaaaagacagttcaAATACATTTAGACTTTATGGACTGACGCCTGATTAAAACACGACATTTTAATAAGTTGGCTGTAAATGTTTTAAACTCGGTCGAGAGTTTTTGAATGAGATCTTGAGTGTAACATTTCGTAGACTCGCTCAATTATTTCATTATCTATTACTATTTATACATCTGTATTTATAGTACAATATCCAAATATCATGAATTTAGTTCCAAATATCATCTTGGTTGTGTGCCACACCTCTCAGACCTcaatcccccccccaaaaaaaataaacacactggTGCACAGCTGCTTCAGTCTTCCTTAAGTACAGGGGACGGAGCCAACCACTAACGATCAAATCAGGATTACCTGAGCAGTGCAGACAGGGAGAAGCAAAACAAGGGGGGAGCTTGTAACACTCACGTGTTGGGTTCTCATGTGGGTCTTTAAATTTCCACTCTctgtaaaagctttcttacagactgagcagctaaatggtttctctcctgaATGATATCGCATGTGTCTCTTTAAACTTTCGTTCACTGTAAAGGCTTTCTTACAGattgagcagctaaatggtttctctcctgtgtggattatCATGTGTCTCTCTAAATGTCCTCTCACCgtaaaagctttcttacagactgagcagctaaatggtttctctcccgtgtggattctcatgtgtgccTTTAAACTTCCACTCGCTGTAAAAGTATTCTGACAGacagagcagctaaatggtttctctcctgtatgAGATCTCATGTGTCTCTTAAGACTTGTCTTCCAGAcaaatcttttcccacactcagagcagctaaatgCTTTCTCATCAGTAGTACATGTTGAATCACTACCAGGGAATGTATCAttattcagagagtttaaacctgactgaggttctctggtctccttccaatcagtctcaggttcagaagagtctccagtctcgCCATCAGTGTCTGGTTGTAAATGTGTATCTGGATCTGATTTcatggctggttctggtcctccacagtcctctccatcagcttctgtttttaactcttcagtttgtctttgatgaagctgtgagaacataggtttctcttcatcatcttcactcttcacagggacaggagtgaatgtgaacttggtgatatcagcctcctccagcccttgaagctgctcttcATCCTGACTGATCCGGAACtcctcctgttcttctttaatGTGGGGGGGCTTTGTGTCCTCCTGGTCCATACTGGAGCTCCACTCCTGCTGATGTTCTTCACCAACAATCACTTTCTGGACATCTGAAGGTAAAGGTGaaacacaaactaacagctaTTAATGTGAATGTTAACAATAATTTGATACATAGCTCTATTCACTCTCATAATAAATAGGGGTGTCAGTATTTTCAATTCAATCTTCgatttaca

Function

GO: NA

KEGG:

id description
ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase

RNA

RNA id representative length rna type GC content exon number start site end site
TU319479 True 1690 lncRNA 0.40 2 16681727 16711192

Neighbor

gene id symbol gene type direction distance location
LOC120554206 NA coding downstream 43532 16616703 ~ 16638195 (-)
LOC120554223 NA coding downstream 125272 16531962 ~ 16556455 (-)
trnat-cgu_16 NA coding downstream 176797 16504858 ~ 16504930 (-)
trnam-cau_66 NA coding downstream 181197 16500458 ~ 16500530 (-)
trnat-agu_41 NA coding downstream 225266 16456388 ~ 16456461 (-)
trnat-agu_55 NA coding upstream 17242 16728434 ~ 16728507 (-)
trnat-ugu_45 NA coding upstream 152685 16863877 ~ 16863949 (-)
trnat-agu_60 NA coding upstream 153241 16864433 ~ 16864506 (-)
trnat-cgu_22 NA coding upstream 160664 16871856 ~ 16871928 (-)
trnat-agu_61 NA coding upstream 161849 16873041 ~ 16873114 (-)
LOC120554273 NA non-coding downstream 114636 16562804 ~ 16567091 (-)
LOC120554287 NA non-coding downstream 175096 16505591 ~ 16506631 (-)
trnat-cgu_15 NA non-coding downstream 327778 16353877 ~ 16353949 (-)
LOC120554275 NA non-coding downstream 336462 16340797 ~ 16345265 (-)
G235351 NA non-coding downstream 357491 16322888 ~ 16324236 (-)
G235413 NA non-coding upstream 55474 16766666 ~ 16775545 (-)
G235427 NA non-coding upstream 162643 16873835 ~ 16876854 (-)
LOC120554268 NA non-coding upstream 164817 16876009 ~ 16916699 (-)
G235471 NA non-coding upstream 464430 17175622 ~ 17175960 (-)
G235512 NA non-coding upstream 555068 17266260 ~ 17330177 (-)
G235387 NA other downstream 65411 16611983 ~ 16616316 (-)
LOC120554218 NA other downstream 328850 16326093 ~ 16352877 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 393577 16248694 ~ 16288150 (-)
LOC120554377 LOC103355861 other downstream 1667913 14966316 ~ 15013814 (-)
G234898 NA other downstream 1831990 14847834 ~ 14849737 (-)
LOC120554263 NA other upstream 24994 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 44801 16755993 ~ 16756065 (-)
G235350 NA other upstream 353110 17064302 ~ 17103517 (-)
s100b LOC103360204,LOC104927403 other upstream 1023539 17734731 ~ 17745257 (-)
LOC120554370 LOC103370263 other upstream 1559886 18271078 ~ 18327103 (-)

Expression


Co-expression Network