G235571



Basic Information


Item Value
gene id G235571
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17411986 ~ 17413880 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU319728
CCAAGAGTCAGGTCATTCCACTATACTTTGTGTCACATATCACGCGCTTACAAAACACTGACCTTGTTGCCTGTTCCCCCCTTGATCAGAGAAGACTttttcatttcaggcattatctcACCCTACTTTTGTAATGTCAAGTCACTGTAGAACTAGATGGCCTCTCAAAACCCAGGGAAACGAGACAACAAGGTCAAAATCATGAACTCTACAATCCTGTTAGCTTACTCTCACAAATATATTCTAAcagtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatcttctcgtTATGAGGTcgtaaggggaaaggttacctcccctttctctgctttgcccgcccagagaatttggcccacccatgagaaagagacatcatgg

Function


NR:

description
uncharacterized protein LOC110514198

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU319728 True 400 lncRNA 0.45 2 17411986 17413880

Neighbor


gene id symbol gene type direction distance location
LOC120554244 NA coding downstream 126674 17278354 ~ 17285312 (-)
LOC120554225 NA coding downstream 177284 17218191 ~ 17234702 (-)
LOC120554205 NA coding downstream 203673 17185387 ~ 17208313 (-)
LOC120554231 NA coding downstream 251791 17143971 ~ 17160195 (-)
LOC120554233 NA coding downstream 385255 17016204 ~ 17026731 (-)
nab1b nab1,LOC102789507 coding upstream 26516 17440396 ~ 17473159 (-)
LOC120554203 mfsd6 coding upstream 77287 17491167 ~ 17507261 (-)
LOC120554202 LOC102788442 coding upstream 134703 17548583 ~ 17597150 (-)
ahr2 NA coding upstream 191042 17604922 ~ 17688512 (-)
LOC120554260 NA coding upstream 305117 17718997 ~ 17732940 (-)
G235542 NA non-coding downstream 46551 17365200 ~ 17365435 (-)
G235512 NA non-coding downstream 81809 17266260 ~ 17330177 (-)
G235471 NA non-coding downstream 236026 17175622 ~ 17175960 (-)
LOC120554268 NA non-coding downstream 495287 16876009 ~ 16916699 (-)
G235427 NA non-coding downstream 535132 16873835 ~ 16876854 (-)
G235635 NA non-coding upstream 98737 17512617 ~ 17544436 (-)
LOC120554284 NA non-coding upstream 275090 17688970 ~ 17707496 (-)
G235688 NA non-coding upstream 437188 17851068 ~ 17851341 (-)
G235691 NA non-coding upstream 440304 17854184 ~ 17855048 (-)
G235695 NA non-coding upstream 444186 17858066 ~ 17858278 (-)
G235350 NA other downstream 308469 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 655921 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 669698 16736186 ~ 16742288 (-)
G235387 NA other downstream 795670 16611983 ~ 16616316 (-)
LOC120554218 NA other downstream 1059109 16326093 ~ 16352877 (-)
s100b LOC103360204,LOC104927403 other upstream 320851 17734731 ~ 17745257 (-)
LOC120554370 LOC103370263 other upstream 857198 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 990346 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 2109624 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 2317439 19731319 ~ 19732537 (-)

Expression



Co-expression Network