G235578


Basic Information

Item Value
gene id G235578
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17491271 ~ 17494315 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319740
TCCTCCGGGAAGACAACAGGAAGAAGAACACAGAATACAGGGAATTGTTTGGCATGAAAATGGGAAACAAAGACGGTAAATATAGCTAATTGGCTATTGGCAGCTTCTATACAAAATTATTGGAAGCGGGCTTGAGAAAGACCCAGAGTACGACAGCTCGTTCTGTAGGAGTGGAGCACGGCAAAGGGATCCTCGCTAGACTTCTCACGGTACAAAGTTAGAACAGTAATGACGATTAAGAGGCTTACGGTGGGTTTAAAAGAGGCACATCTTCATCACCGCTCCTCCCGTTAATTATACAAATACATCTCAACCAACAGTCCGTTCCCGTACGGAGTACAAAAGTGGGTTTGGGTTTTTGAAAGAAGTGatcaaaatgtgaaataaaaaggTCAACTTGTTTttcccttctttctttttttcccctgtcaTCTGAGCCGGCGTTTGGAAACAAATTCAACATTGATTAATTCAAGATTTTGCAActactgttctttttttttaaattaaatgattaCATTGGTTCCCAAATCCTAAGGCCACAGACGGTTTGCTGCAGAGCTTGCAGGGAAATGATGCAAGTCGGGCAAAAGAAGCTCAACAATTAAATTCTTTTAGAGGATAACAGAGCAGGGTTTGGGAAGGATTTAACGAGCTAGatgttttaagactttttaacaGCTCAGAGAATATGATTTAATACCCGTTTCACGATCACACCGGCCAAAGTATGTCCCAGTATTTCCCCCGCAGCATACACAGAACACCAATTCCTGCCAGTAAAGTTCCATTTTGGTCTCTGTTCATTAAAATATTATCCCTGTCAACTCATTTGTGTGTCGGGATGATAGAGTGGAAAATTATGGGGTATGTAAAAACCAGCATTTTTATTGTGAATTTATTTGTGTGCAAAGTGATGGTGTAAACAATATGCAATTAGGACCCCgttaaaaatgcattttaatgggTTACGTTTTGTGTCGGCATAAAGTTGACACTTCTTTTAAGAGCTGTTTGTGTTCTTGCGGAATCAAAAATGCTGAATTAAACAACCACATTGTCAAAttgcatcactttttttttttttaaagtagattAAGTTAATAAATAACACTCCACCGGTAGAGGGCAGAAAATAAATAGTGCACAGCGCCGCGAGGTGCGTTAGATTCGACCATAtctgaagggggggggggagaaagccACCTAGCGCACCTCCAACATTCATCCAAACATTCAACCCAAACTCCcctttgcaaaaaaaaacacaatctatTAACAACAAAGTCATGTCTGAGTTGCAGTATTTCCAACTTTTCAAAGCGATTTGTACAATACATGTATATAAATACAGTGTTTTGTCAAGATACTGACTCATTTTTAAGGACGTACTGTGACATGAGCGAAAAGCAGCGTGTGTAAAGGTAAAACTGCTTGGGACTGAacagtcagtgtgtgttttcagctggGAAGGCTGGGTTGTCTTCCCCACCGTCTGAGGACGGGCGTGTTTGGTCTTTGTCCTCGTTAGAGTctgtgggcgctggacgggcgGCATTTATTTGCGTGGGCGCTTCCGTGCCGTCATCACCGGGGTTTCTGTGTGACGTCGCCACCGCCTTGTACTCGGCCGACGCCTGCTCATTAGGTAcctACCTGCAGGGGCTGAGTCTCTGTGGGCGGCGCGCGGCTCTTCACCATGTTCATCATCTCCTTGATCTGGACGATAGCGAAGGCGATGGTGACCCAGGGGGCGCCTGAGAGCACCCAGGCGGGTCTGCTCAcgtcctcctgctcctcctggtGTTTGGTCTTAATGATGGGCAGCGGGGCGGCCAGGCGTGCCGAGGTGGGGCTCCCGGGGACGGTCTGGCTCTGCACCAGGTCGATGGTAGCGATGGGAACCGGGCTGGAGGGAACCGGGATGTTCTCGGCCAGCATTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319740 True 1946 lncRNA 0.45 2 17491271 17494315

Neighbor

gene id symbol gene type direction distance location
LOC120554248 LOC103366962 coding upstream 127206 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 148242 17340047 ~ 17343029 (+)
LOC120554229 NA coding upstream 184333 17289184 ~ 17306938 (+)
LOC120554211 NA coding upstream 222974 17221309 ~ 17268297 (+)
LOC120553999 NA coding upstream 312458 17169385 ~ 17178813 (+)
LOC120554200 sh3bp4,LOC103360214 coding downstream 281217 17775532 ~ 17807753 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding downstream 341579 17835894 ~ 17836902 (+)
LOC120554001 LOC103375332 coding downstream 694335 18188650 ~ 18238425 (+)
orc4 orc4 coding downstream 949864 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 1529833 19024148 ~ 19127654 (+)
G235552 NA non-coding upstream 99848 17387631 ~ 17391423 (+)
G235548 NA non-coding upstream 108186 17382855 ~ 17383085 (+)
G235547 NA non-coding upstream 110071 17380905 ~ 17381200 (+)
G235530 NA non-coding upstream 141185 17349865 ~ 17350086 (+)
G235501 NA non-coding upstream 145348 17345465 ~ 17345923 (+)
G235587 NA non-coding downstream 15178 17509493 ~ 17509695 (+)
G235589 NA non-coding downstream 18411 17512726 ~ 17542161 (+)
G235591 NA non-coding downstream 47165 17541480 ~ 17846317 (+)
G235614 NA non-coding downstream 227781 17722096 ~ 17727093 (+)
G235619 NA non-coding downstream 235154 17729469 ~ 17732780 (+)
trnat-cgu_25 NA other upstream 539502 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 540777 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 558665 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 728663 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 729699 16761499 ~ 16761572 (+)
als2b NA other downstream 388150 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 458824 17953139 ~ 17966226 (+)
G235775 NA other downstream 672971 18167286 ~ 18171954 (+)
G235778 NA other downstream 682510 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2177557 19671872 ~ 19698895 (+)

Expression


Co-expression Network