G235614


Basic Information

Item Value
gene id G235614
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17722096 ~ 17727093 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319780
TTTCTGGAGAAGATATAAATGCtgcatttgtatttttcatGATAAAAAAGGTATTGGAGTAAATCCTGGCTTTAAATGGTCAGAAGAAAATGCACTGTGGAGgtatttaaaacaacttttcGCTGCTGGTCTCTTATCCGTTAGCGTCATTAAATACAATCAGGAGAAACCAGGTTCACTTCTCACCTCCGATCAGGGCTGCAAAAGCTCCATCGTCCAGGGCGATGCCTGGAAAAGACCCAAATCAAACTTCACATGAAATGCAAATTGAATTAATTCATTGTCTATCACTTAGTTATACGTAGCTTTTCCAAAAGGCaatactttgtaaaaaaatggcaaattgtTTTATCCGACACGCACTGTGCGCTTCATAAAGGGGCCCTTATgactcaggtggtagagcgggaCCAATCGGAAAGCCGGtagttcgatccctggccctgcagtcccatgtcgaagtgtccttgggcaagacccTGAACCCCGAATTGCTCCCGAtcctgcgccatcggagtggaAGACGTCCGGTATACTCACCGTTCCCGAACTGTCGCGccagtgtgacgtcatgggagcgccgtgACTGTGCATACTCGCGCGTGGTGGTCCCGACACTAGTtacagtcttctcctgaacacaGGTGTCGCAACTttggaaaggctaccgactttgctatttctacggactagaagaagaagaaaaaagATGGAGTTTATCTCATTAAAGTATGTGGCATCAGATGACCTCCCAGTCGGTCATCAATCTGCACCCTGCTACACCGACACCAGCCAAGCAGCCAGGACTTGATTTTCAACAGCAGGTAAACAAAGCAGAGCTAGAAGTGGCCACAGTGGAGGAAATGTTGCCTGTTTGGACAGTGGAATCGCTGGTTCTCCCAAACAGACTgggcaaaatacagataatgaAGAGCAGACGCCAGTACATCTTGACAAATGTGGTGTGAAAGAGCAGAGAAGAGAGCTCTTGTGTTATGTCCTCATTATAATAAGGGTTTGTGTTGATCTGGACATAAGTGAGGTTTAACTTTATATTGTTATTTGGCAAGTCAGttaggctatgttcacacttggctctctctctctgttctttctctagctcgctccaccactttgttttatctaacgttagcacctctctctctctctctctctctctctctctctctctctctctctctctctctctctgttctttctctagctcgctccaccactttgttttatctaacgttagcacctctctctctctctctctctctctctctctctctctctgtctctccgttctttctctagctcgctccaccactttgttttatctaacgttagcaccgctccacatagcgctctaggatactgtagcagtagctgttgttatagcaacaaaagacaCTCTCGGCTGCTTTTTGGAACAAAAACGCTGCCAGCATCTTCAATTTTTTCTCGTCAAAAAAGATGACTTATGGTGCATCTCAGGTGATGTTAGGGAGTATTCCAAAAGTAATGTAACTAGTAGTGTAAGTAGTTACTTTCAGCAGCGACTAATGGGTaatctattactttttttggagTAACTACCCCAACATTACCTGGTGGGGGCGGAGGAGGCAATTGTAACATCATCTGTTTGTGAACGAGAGAGGGGTGACGGGGGAAGTCTTATTTTTGCTGACTGCTGTTTTCGCGCTTTTCTAATGCTGTTTACTGCCGTTTGTCATGACTTTTGGACACCATTTCGTATGCCATTGAAAACAATTATGGGATGTATTGGATGCAGAACCTTGTTTGTTCCtcataaaaacaaaatctaCAAAAATCCCCTTTGGATCCCCGTGATCATTATCAGCAGGGCGCGTCTGGCAAGCAAGTTCTTCCCCTGCTCAGCCTCTTGGCGGCGAAAAATTAAGTTCCAGATATTTGCCTATAGTGACAATGAAGgctttctattctattctattacaAACCATGTGGTGTTACGCCCGTGATAAAGCTACGGCAGCACAATCCAACCATGCATGGTATTCAAACACCCTCCGTCTATTTTAAAGCCTCAATGTGTGACAGAGACGAGGTGACAGAGGCTGCTTTTACACTTCAGGGCCAAACAGGGAAGCTCTGTACCTACTGTACACTCTGAGAAATAAAGCcgtaaaataacaataataataataatagttctGGCAGCTCATTACCTCCGGACTTTGCcccacaattaaaaaaaacaacctggaAATTTAGTGTGTAACTGCAGTTAAAGTACAGAAAATGTTATGCTAGACCTATTATATTAAATTCTCTAATACAAAAATGCTCAGTTTGTAATCttcttaaaaatatatatataaaaaaaggatcCATAGATGGTCTTACAGATGAAATAAGAgcacatttttagttttcttgAGAGACCGGGAAAGTGAAGTTGATATATTTGAGATAGAATAGAAAATAAGCAAACGCATGTCTGACTCTAAACTTTTAAGCTACTTATCAACTGCGAATATTTGAAGTTTCGGCGGCAGCGGCGTGGCTGGGGGGGGGAGCCGGGGGTCAAAATTTTATCcgcgtttaaaaaaacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319780 True 2604 lncRNA 0.43 2 17722096 17727093

Neighbor

gene id symbol gene type direction distance location
LOC120554248 LOC103366962 coding upstream 358031 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 379067 17340047 ~ 17343029 (+)
LOC120554229 NA coding upstream 415158 17289184 ~ 17306938 (+)
LOC120554211 NA coding upstream 453799 17221309 ~ 17268297 (+)
LOC120553999 NA coding upstream 543283 17169385 ~ 17178813 (+)
LOC120554200 sh3bp4,LOC103360214 coding downstream 48439 17775532 ~ 17807753 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding downstream 108801 17835894 ~ 17836902 (+)
LOC120554001 LOC103375332 coding downstream 461557 18188650 ~ 18238425 (+)
orc4 orc4 coding downstream 717086 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 1297055 19024148 ~ 19127654 (+)
G235589 NA non-coding upstream 179935 17512726 ~ 17542161 (+)
G235587 NA non-coding upstream 212401 17509493 ~ 17509695 (+)
G235578 NA non-coding upstream 227781 17491271 ~ 17494315 (+)
G235552 NA non-coding upstream 330673 17387631 ~ 17391423 (+)
G235548 NA non-coding upstream 339011 17382855 ~ 17383085 (+)
G235619 NA non-coding downstream 2376 17729469 ~ 17732780 (+)
G235609 NA non-coding downstream 15699 17742792 ~ 17745153 (+)
G235625 NA non-coding downstream 88622 17815715 ~ 17828471 (+)
G235630 NA non-coding downstream 109977 17837070 ~ 17838244 (+)
G235703 NA non-coding downstream 164497 17891590 ~ 17902611 (+)
trnat-cgu_25 NA other upstream 770327 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 771602 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 789490 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 959488 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 960524 16761499 ~ 16761572 (+)
als2b NA other downstream 155372 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 226046 17953139 ~ 17966226 (+)
G235775 NA other downstream 440193 18167286 ~ 18171954 (+)
G235778 NA other downstream 449732 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 1944779 19671872 ~ 19698895 (+)

Expression


Co-expression Network