G235699


Basic Information

Item Value
gene id G235699
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17939094 ~ 17940272 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319878
tttacttgtgaagaggtTTGTATGGAATTTTGtttggacaatttggttgaaagaaacccaaatttctgatgaacccgaggacaacaggaggattGATGCAAACACTGTTTTTATAGATGGGATGTTCAAAGCTGACTATCTGCGCCATCTGTTAATACTgactgttctttttttatttattttttttaaacccttacAGCACAAACTGTCAGACATTGTTGGTTTATTTTGTGATTTGCGTCACACATGCCAGTTTTATAAAAGGGCTTAGGGAGGGATTCAGAGGATGACCAAGCCTTTATTTCTAATTTGAAATGTCATGGCTTTTGTTTTCTGCAGATGGTTTAATAATAGAACAGCCAGTGGATCACAGGCCTCGTATTTTTTTTTGAAGGGACTAAATTAAGGTGAAGCTGATGTTTCCCTTGTGCAGGATATTGAAAATCTGGCAACAGCAAataggcatcaaaactgtttaAGTTTAAAGCTCTTGTTGTCAGTGGTGGAGTCCTCGAGACTTGGACTCGAACACTGGTGACTCGAGACTTGATTTTTGGCAAAAACCGAAAAACATTCTTCATGTATTACATTATTTTGTCAGAAACAGAGACTTTAACTTTTGTGCTGttctttaaaacaaattattatttCACTGACAAAGCGAGGCGTTCTGTTCAGTATGTCGTGTAAACGCAATTTCGTAATTCCGCCATGATTTTCCCCTTAGTGCCACTGCAGCTCGTCTCCGTTTGCTGCGGACACGTTAAAAAACGAAGGACTCAAGTAGTATTTTCAGTGGACTACACAACTGGCTACGAACACAGATTTATTATAATGGTTGTACCCTTAACTGACTCACTTACAAGTGTTATTTTTACAATGCAAAAACTGACTAGTTATTGACATCAACTGAAGATAATGTTCATAAGCTCATGTTGGGATCATGTCCTCAACACATGTTTACTATGAAAACACCAGGCGCAGATCACACATAACTGTTGCATTgtgtattaaaagaaaaacgaaTGTTTTGTCAATGGACTTTGGTGTTCACTAGTTgacattttgtgttttcagCTGGCTGACATGACTCCCACCTGTGTGTCTTTTACATGATGTCAAACGTATTGTACCTTTTAATAATAACCCGTGGGCAATAAACTGATTTGATGGACGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319878 True 1179 lncRNA 0.38 1 17939094 17940272

Neighbor

gene id symbol gene type direction distance location
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding upstream 102192 17835894 ~ 17836902 (+)
LOC120554200 sh3bp4,LOC103360214 coding upstream 131341 17775532 ~ 17807753 (+)
LOC120554248 LOC103366962 coding upstream 575029 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 596065 17340047 ~ 17343029 (+)
LOC120554229 NA coding upstream 632156 17289184 ~ 17306938 (+)
LOC120554001 LOC103375332 coding downstream 248378 18188650 ~ 18238425 (+)
orc4 orc4 coding downstream 503907 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 1083876 19024148 ~ 19127654 (+)
LOC120554051 xdh coding downstream 1572630 19512902 ~ 19522669 (+)
LOC120554004 NA coding downstream 1645263 19585535 ~ 19599669 (+)
G235703 NA non-coding upstream 36483 17891590 ~ 17902611 (+)
G235591 NA non-coding upstream 92777 17541480 ~ 17846317 (+)
G235630 NA non-coding upstream 100850 17837070 ~ 17838244 (+)
G235625 NA non-coding upstream 110623 17815715 ~ 17828471 (+)
G235609 NA non-coding upstream 193941 17742792 ~ 17745153 (+)
G235707 NA non-coding downstream 2548 17942820 ~ 17943107 (+)
G235710 NA non-coding downstream 30707 17970979 ~ 17971360 (+)
G235711 NA non-coding downstream 31861 17972133 ~ 17973526 (+)
G235713 NA non-coding downstream 36487 17976759 ~ 17977076 (+)
G235739 NA non-coding downstream 42600 17982872 ~ 17983828 (+)
als2b NA other upstream 783 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 987325 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 988600 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 1006488 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 1176486 16762536 ~ 16762608 (+)
LOC120554216 mpp4 other downstream 12867 17953139 ~ 17966226 (+)
G235775 NA other downstream 227014 18167286 ~ 18171954 (+)
G235778 NA other downstream 236553 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 1731600 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 1956820 19897092 ~ 19986729 (+)

Expression


Co-expression Network