G235746


Basic Information

Item Value
gene id G235746
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18006331 ~ 18006763 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU319930
agtggcaacaccataactgctatcagtcaaatgacgtgatcctgagcatcacaaggcctttgtgaacgtatcggtataaaatttatatggataaacgtaaaaatgtggtcatatcagcgatttcaaaaagtggttcgttcagtgtttcgctgggaaatatctaggagtttgatcattgaagccaatggagaacgatatggacatcttgtcatttggaagctcaaccagccaaaagtaaaaggcgtatcacaaaactgagcagattttctgaaactagacaaaaatacctacgttttgatgtataaattgtgtatgacaagtagatattgtgggcgtgagagcaatttgaggagaagggacaaagataatttttttgaagcttcaccctctgagcgatgacatcatcactctaaccagccacacacacactctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319930 True 433 lncRNA 0.39 1 18006331 18006763

Neighbor

gene id symbol gene type direction distance location
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding upstream 169429 17835894 ~ 17836902 (+)
LOC120554200 sh3bp4,LOC103360214 coding upstream 198578 17775532 ~ 17807753 (+)
LOC120554248 LOC103366962 coding upstream 642266 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 663302 17340047 ~ 17343029 (+)
LOC120554229 NA coding upstream 699393 17289184 ~ 17306938 (+)
LOC120554001 LOC103375332 coding downstream 181887 18188650 ~ 18238425 (+)
orc4 orc4 coding downstream 437416 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 1017385 19024148 ~ 19127654 (+)
LOC120554051 xdh coding downstream 1506139 19512902 ~ 19522669 (+)
LOC120554004 NA coding downstream 1578772 19585535 ~ 19599669 (+)
G235744 NA non-coding upstream 6393 17999595 ~ 17999938 (+)
G235740 NA non-coding upstream 21377 17984690 ~ 17984954 (+)
G235739 NA non-coding upstream 22503 17982872 ~ 17983828 (+)
G235713 NA non-coding upstream 29255 17976759 ~ 17977076 (+)
G235711 NA non-coding upstream 32805 17972133 ~ 17973526 (+)
G235754 NA non-coding downstream 59129 18065892 ~ 18112987 (+)
G235771 NA non-coding downstream 154176 18160939 ~ 18196324 (+)
G235782 NA non-coding downstream 184545 18191308 ~ 18191963 (+)
G235788 NA non-coding downstream 204781 18211544 ~ 18215021 (+)
G235869 NA non-coding downstream 350321 18357084 ~ 18360812 (+)
LOC120554216 mpp4 other upstream 40105 17953139 ~ 17966226 (+)
als2b NA other upstream 68020 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 1054562 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 1055837 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 1073725 16880639 ~ 16932606 (+)
G235775 NA other downstream 160523 18167286 ~ 18171954 (+)
G235778 NA other downstream 170062 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 1665109 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 1890329 19897092 ~ 19986729 (+)
G236162 NA other downstream 1990036 19996799 ~ 19997667 (+)

Expression


Co-expression Network