G235871 (LOC103370269,LOC103389621)


Basic Information

Item Value
gene id G235871
gene name LOC103370269,LOC103389621
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18375165 ~ 18376385 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320096
CGTCTtgtgctgcagctcctccaccagCTGTAGGTTGGCTCGGTCTCTCTCCCCCACCTCCTGGCTCTTCTGGTCGTAGTTGACGGCCAGCtcctccagggcctgcagcacCTCCTTCACCTCCTCCTTGGCCAGCTCGTTCTCCGCCTGCAGCCGGCACAGCTCCTCTTGGATCTTCTCGTAGTCGCGCCGTGTAGACGCCAGCAGCTCTTCTTGGTCGATCATCTGCTCCTTAAGTTTCTCTGCCAACTGACTGTGTTGGTTGATCT

Function

NR:

description
PREDICTED: kinesin heavy chain isoform 5C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320096 True 269 lncRNA 0.59 2 18375165 18376385

Neighbor

gene id symbol gene type direction distance location
LOC120554001 LOC103375332 coding upstream 136740 18188650 ~ 18238425 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding upstream 538263 17835894 ~ 17836902 (+)
LOC120554200 sh3bp4,LOC103360214 coding upstream 567412 17775532 ~ 17807753 (+)
LOC120554248 LOC103366962 coding upstream 1011100 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 1032136 17340047 ~ 17343029 (+)
orc4 orc4 coding downstream 67794 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 647763 19024148 ~ 19127654 (+)
LOC120554051 xdh coding downstream 1136517 19512902 ~ 19522669 (+)
LOC120554004 NA coding downstream 1209150 19585535 ~ 19599669 (+)
si:ch211-246m6.4 LOC103371115,LOC103149479,LOC104942297 coding downstream 1226336 19602721 ~ 19607000 (+)
G235870 LOC103370269 non-coding upstream 4049 18368908 ~ 18371116 (+)
G235869 NA non-coding upstream 14353 18357084 ~ 18360812 (+)
G235788 NA non-coding upstream 160144 18211544 ~ 18215021 (+)
G235771 NA non-coding upstream 178841 18160939 ~ 18196324 (+)
G235782 NA non-coding upstream 183202 18191308 ~ 18191963 (+)
G235874 NA non-coding downstream 14216 18390601 ~ 18466276 (+)
G235913 NA non-coding downstream 230501 18606886 ~ 18607096 (+)
G235914 NA non-coding downstream 321261 18697646 ~ 18697853 (+)
G235915 NA non-coding downstream 411023 18787408 ~ 18787617 (+)
G235918 NA non-coding downstream 582270 18958655 ~ 18958873 (+)
G235778 NA other upstream 193353 18176825 ~ 18181812 (+)
G235775 NA other upstream 203211 18167286 ~ 18171954 (+)
LOC120554216 mpp4 other upstream 408939 17953139 ~ 17966226 (+)
als2b NA other upstream 436854 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 1423396 16951697 ~ 16951769 (+)
anos1a LOC103358938 other downstream 1295487 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 1520707 19897092 ~ 19986729 (+)
G236162 NA other downstream 1620414 19996799 ~ 19997667 (+)
prkx prkx other downstream 1831944 20208329 ~ 20234852 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 1978917 20355302 ~ 20377740 (+)

Expression


Co-expression Network