G235908


Basic Information

Item Value
gene id G235908
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18533447 ~ 18534684 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320137
ctttgagaaaatgaaagctcagatggaccgatctggaatcttctccttatgaggtcataaggagcaaggttatctcccctttctctgctttgcccgcccagagaatttggcccacccatgagagagagacatcatggctttcaaacgagcaaagtggtagttggtcaaggccacacccccaccctccaccctgtctcctcctcagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaagggctatataaaagagacttcagatacagtattaggggaccactaagggctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattagggaccactaaggtctatataaaagagacttcagatacagtattagggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaagggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactgaggcctatataaaagagacttcagatacagtattaggggaccactgaggcctatataaaagagacttcagatacagtattaagggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatccaaagagcagcatgtcataggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320137 True 1238 lncRNA 0.41 1 18533447 18534684

Neighbor

gene id symbol gene type direction distance location
acvr2ab acvr2a,LOC102784913,LOC103371821 coding downstream 10431 18465948 ~ 18523016 (-)
LOC120554003 LOC103370269 coding downstream 131234 18357104 ~ 18402213 (-)
LOC120554329 LOC100698054,LOC102783597 coding downstream 180104 18342713 ~ 18353343 (-)
LOC120554384 NA coding downstream 193028 18328508 ~ 18340419 (-)
LOC120554369 LOC104960229 coding downstream 263778 18262836 ~ 18269669 (-)
kynu kynu,LOC102785701 coding upstream 1016752 19551436 ~ 19581258 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding upstream 1073938 19608622 ~ 19621651 (-)
aox6 NA coding upstream 1087418 19622102 ~ 19654312 (-)
pnpla4 pnpla4 coding upstream 1214387 19749071 ~ 19755969 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding upstream 1840909 20375593 ~ 20380492 (-)
G235844 NA non-coding downstream 232494 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding downstream 275941 18256943 ~ 18257506 (-)
G235816 NA non-coding downstream 319279 18210503 ~ 18214168 (-)
G235793 NA non-coding downstream 419490 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 547269 17985922 ~ 17986178 (-)
G235929 NA non-coding upstream 62315 18596999 ~ 18597208 (-)
G235930 NA non-coding upstream 213746 18748430 ~ 18748645 (-)
G235931 NA non-coding upstream 252685 18787369 ~ 18787622 (-)
G235933 NA non-coding upstream 359223 18893907 ~ 18894507 (-)
G235935 NA non-coding upstream 384871 18919555 ~ 18919801 (-)
LOC120554371 mbd5,LOC102784158 other downstream 94029 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 206344 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 788190 17734731 ~ 17745257 (-)
G235350 NA other downstream 1429930 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1777382 16755993 ~ 16756065 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 988820 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1196635 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 1832657 20367341 ~ 20368433 (-)
G236340 NA other upstream 2191719 20726403 ~ 20728427 (-)
G236349 NA other upstream 2226024 20760708 ~ 20760992 (-)

Expression


Co-expression Network