G235912


Basic Information

Item Value
gene id G235912
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19127693 ~ 19129176 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320142
ATGGACTCAAAAGTCAATCCGGAGGAGGGCGTTGATGGGAAGGGAGGCATGGGTTTGTGAAATAAGCTGCATTATGCAAACCGAACAATGGACAAacgaatacatttaaaaaaaatgtacagtactAAGGCCTAAAAATATGTGTGGTGCTAACCTCTTCAAataacccccccctcccccatcccCGTGTTCCATAGTATTTATAGCACAACTAGTGACTTGTACAAATTGCACTCCGCTTCTATAATcatgaacaaaaataataaaaagtattgcctatgtatatatttatacagtGTTGGAAAAAGAGCAGTAGTGTCTGCACTACAGTCCTTCGATATTACCTTTGTTatcacctacctacctaccttccttcctacctacctacctacctacctacctacctacctacctaccttccTACCTACCTACGGTGTTGTCTTTAGTTTTTGCCATGTTGCCGGGGCCACAAACATCTCCAGCCACACGATTTCAGGCCTCCGAATCAAACGTCAAAATGAAggaatttaaacaaaaagactgaATGaaggagcttttttttttttttagagagacCTTCGTTTTAAGGGAAAATACAATTTATGGACAGATGGTATttcggggggtggggggagggggatgaAGGACAAAGCCTTTGTAAGGTGTTTTTGATAAGAAAAAAGAAGCCTTATATGCAAACCTTTTaacctgtgtgtttttctgcaaGTGCCACCCTCGTATTGTGTAAAAGGAAAGGTTAATTTTAGTTTCACCAGCTTTCAGTATTATGAAATGGTTCACCGTTGTTCTTTGAAGCATCCGTGTCAGTATTAATAAGACGTGTAGGCAGCAGTTCCTTAGTTTACATTATGTTGtgcaatgttttctcagtttctTTGAACTTTTGTCAGTATTAcaccaaaccttttttttttttgaaaacaacaaattgcatttcattttatttgtaggttgaaaaaaaaaaaaacattatttatgtGGCCCATTTTATATTtcctaattttatttatttcctactGTTGTGTACAGTACTATAGTTCTtcaatatatagatatattttaGTAAAAAGGAACATGGTGTTGATCATAGGGGCAAATTTTACGTAAAGAGAGCATTTATTGTGTTTTGAAACATTGTGAAATGCGAAAGTttaatcttattttatttttatttttccttttattttccagCTTGTGGGAAATTCCAAAATTTGGGAACTTTTATACAATTGTGAAAACACTGTATTTtcgactgaaaaaaaaattccactttcttcatctttgttttctttttttaagctgaaaaaaaaaaatgaagagggACTGTTAAATACTATGTATGATATCATGACTGAAGAAGAATCtttcctgaaaatgtctttgTAAAAGTATTATTGAATTCTTAATTTGTAATTTCTCTTGAAAATGAACCCTGCTCGAATAAAAAGTAGCCAAATTACAGA

Function

GO: NA

KEGG:

id description
ko04360 Axon guidance

RNA

RNA id representative length rna type GC content exon number start site end site
TU320142 True 1484 lncRNA 0.35 1 19127693 19129176

Neighbor

gene id symbol gene type direction distance location
zeb2b zeb2,LOC103355929 coding upstream 39 19024148 ~ 19127654 (+)
orc4 orc4 coding upstream 674691 18444179 ~ 18453002 (+)
LOC120554001 LOC103375332 coding upstream 889268 18188650 ~ 18238425 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding upstream 1290791 17835894 ~ 17836902 (+)
LOC120554200 sh3bp4,LOC103360214 coding upstream 1319940 17775532 ~ 17807753 (+)
LOC120554051 xdh coding downstream 383726 19512902 ~ 19522669 (+)
LOC120554004 NA coding downstream 456359 19585535 ~ 19599669 (+)
si:ch211-246m6.4 LOC103371115,LOC103149479,LOC104942297 coding downstream 473545 19602721 ~ 19607000 (+)
sts sts coding downstream 583508 19712684 ~ 19732543 (+)
LOC120554574 NA coding downstream 687589 19816765 ~ 19818483 (+)
G235918 NA non-coding upstream 168820 18958655 ~ 18958873 (+)
G235915 NA non-coding upstream 340076 18787408 ~ 18787617 (+)
G235914 NA non-coding upstream 429840 18697646 ~ 18697853 (+)
G235913 NA non-coding upstream 520597 18606886 ~ 18607096 (+)
G235874 NA non-coding upstream 661417 18390601 ~ 18466276 (+)
LOC120554064 NA non-coding downstream 10689 19139865 ~ 19142447 (+)
G235924 NA non-coding downstream 15045 19144221 ~ 19144437 (+)
G235926 NA non-coding downstream 48293 19177469 ~ 19177789 (+)
G235956 NA non-coding downstream 131392 19260568 ~ 19260861 (+)
LOC120554032 NA non-coding downstream 189128 19318304 ~ 19395896 (+)
G235778 NA other upstream 945881 18176825 ~ 18181812 (+)
G235775 NA other upstream 955739 18167286 ~ 18171954 (+)
LOC120554216 mpp4 other upstream 1161467 17953139 ~ 17966226 (+)
als2b NA other upstream 1189382 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 2175924 16951697 ~ 16951769 (+)
anos1a LOC103358938 other downstream 542696 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 767916 19897092 ~ 19986729 (+)
G236162 NA other downstream 867623 19996799 ~ 19997667 (+)
prkx prkx other downstream 1079153 20208329 ~ 20234852 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 1226126 20355302 ~ 20377740 (+)

Expression


Co-expression Network