G235983


Basic Information

Item Value
gene id G235983
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19517467 ~ 19517931 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320214
tttaaataggatctgcagacctgccaaccttgaagaaCTTTTATGAGTACAGACTCCCCGCGCGTACCAATCACCGACAGCCCACTGCCAATATACGCTCCACCGTTGCACTCACCAATGAGAAACCTAACACCATACTACATAATATAATTTCACCAATCAAGATTTATTAGTTACTCCGTAACCATATACAAGTAGACCATAAATGTTATACAATTACTGCTATCACtcctaacattgaattgaaaacaaaccGTTGTACAGGAGGCATAGCCCATGGAAACTTCTTCCAcctgaaaatacattgtttggctcatcactaccttctagattacaataaattattattactgtgtagAGGAGTGGATGAACGGCTGTACGCGTAGTGAAACTActatacaaatgttttcttatatcCTGTCCAATATTTTGTGCCCATATATTAGTTAGTCTAaccaacaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320214 True 465 lncRNA 0.38 1 19517467 19517931

Neighbor

gene id symbol gene type direction distance location
zeb2b zeb2,LOC103355929 coding upstream 389813 19024148 ~ 19127654 (+)
orc4 orc4 coding upstream 1064465 18444179 ~ 18453002 (+)
LOC120554001 LOC103375332 coding upstream 1279042 18188650 ~ 18238425 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding upstream 1680565 17835894 ~ 17836902 (+)
LOC120554200 sh3bp4,LOC103360214 coding upstream 1709714 17775532 ~ 17807753 (+)
LOC120554004 NA coding downstream 67604 19585535 ~ 19599669 (+)
si:ch211-246m6.4 LOC103371115,LOC103149479,LOC104942297 coding downstream 84790 19602721 ~ 19607000 (+)
sts sts coding downstream 194753 19712684 ~ 19732543 (+)
LOC120554574 NA coding downstream 298834 19816765 ~ 19818483 (+)
LOC120554006 NA coding downstream 301935 19819866 ~ 19832208 (+)
G235982 NA non-coding upstream 60 19516942 ~ 19517407 (+)
G235975 NA non-coding upstream 25804 19491411 ~ 19491663 (+)
G235974 NA non-coding upstream 27733 19489349 ~ 19489734 (+)
LOC120554032 NA non-coding upstream 121571 19318304 ~ 19395896 (+)
G235956 NA non-coding upstream 256606 19260568 ~ 19260861 (+)
G235993 NA non-coding downstream 19207 19537138 ~ 19537991 (+)
G235994 NA non-coding downstream 22144 19540075 ~ 19541593 (+)
G236007 NA non-coding downstream 89772 19607703 ~ 19608095 (+)
G236008 LOC101068829,LOC107082828,LOC108245120,LOC105419732,LOC107384676,LOC101480137,LOC102786663,LOC103457358,LOC100708708,LOC103371116 non-coding downstream 90443 19608374 ~ 19616180 (+)
G236041 NA non-coding downstream 105545 19623476 ~ 19624756 (+)
G235778 NA other upstream 1335655 18176825 ~ 18181812 (+)
G235775 NA other upstream 1345513 18167286 ~ 18171954 (+)
LOC120554216 mpp4 other upstream 1551241 17953139 ~ 17966226 (+)
als2b NA other upstream 1579156 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 2565698 16951697 ~ 16951769 (+)
anos1a LOC103358938 other downstream 153941 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 379161 19897092 ~ 19986729 (+)
G236162 NA other downstream 478868 19996799 ~ 19997667 (+)
prkx prkx other downstream 690398 20208329 ~ 20234852 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 837371 20355302 ~ 20377740 (+)

Expression


Co-expression Network