G236044


Basic Information

Item Value
gene id G236044
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19626229 ~ 19627968 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320293
CCTGGTTTAAGAAGCTCTCTGCGAATGCGATCCCGTATTTAATGGGTACGATGGCCACCCCTCTCTTCTTCCAGCGGTTGTCCTGGTTAAAGCGGTCAGCGGCTCTGCGGCGTGCGGCGTAGTCGCTCTTTCCCTTACACTGGTCCCAGCAGCGCCGCAGGTTCTCCGGGCTGAACTCCAACCCATAGTGGGTGACGGACGGACCCTGGTACATGTTGATCTCCCGGATTGGTCTGCGGGGTGTCCCAGCACCATGGCAACGTCGTTGAGCATGTTCTCCAGGACCATGATGCTCTGGGGCACGCCGAACCCCCTGAAGGCGGTGTTGGAGGGCAGGTTGGTACGGCAGGCGGCGCCGCGGCCTCGTAGGTTGGGGATGTTGTAGGCGTTGTCGATGTGGAGCAGAATCTTCTCTACCACCTGCCAGAAGGAAACTCATGATAACATCatactttctttttgtttgtgtaagtgactgatgggaacaccaATCTCttaaactggtccagtatttagAGAGAACAATGTGACCGGCATCGTCcgttagcgtccactaaaagttctgttgttgccgctgacagactccgattattattctaagggtctgacaacattatggaaagagaTAGACATTTTTGTTACAGAGTAAGATCCTCTTTGTTTAACCAGCTCCAAGATTGCTATCGCTACAccaaccagactccatttaaaaaaactacttttagtgtgtagagccagcatattttcatgtttatttcaaccaaaccagagtggtgattgttggaacagtggaaagatgaacatAGACGGCTTTTCATGgttgtattttgtgtctctcgactttgaatgaagtaggttttacgatgataaaattacagtttatttacatggaaacTGGTGGGTTAAGCAATAGCAATTTCTCAGATGtttatatctttaaaaaaaggatcttactcaaAGATCctacaaaaaggtctatctctgtagcgatcctttccataatgttgtcagaataATAATCTTAGCCTGTCAGGGGAAAAAACTTTGAGTGGATGAAAATTGAAGCTGTGCATaacttacattgcagcttgttttgaACGGTTAATCATTAACATCCCTACTTGATATTAAAGCGCTTTTACCCACCAGAGGAGATTCATCCACAGTGTTGCCAGCGTTTGTGTAGTACTGCATATCTGCAGCCATGATCCTTCCATCATTCATGAAACCCACCTGGAACAAACAACTATCAGGTAGCTGAACATCTTCGctgacaaacaacaacaactccgCCATGTTGGATCATCTGATCAAACTGGCTGAAATGAAAGCCAGAGTGTGTGGTTGTATACTTTGTATTTTCCCAGGACGGGGTGACGGGCTCCGCTGATTAGCATGTCCTCTCCTCGCTCCAGGACACAGCGGACCGCACGATTGGTCCTGAAcacaagatgcaaaacaacttcacatcacttttttattgttaaaagaaagttctcatccagtttgttgttgttgagtcattaaagggtaactttttttttttcaacccaaggtttttgtgtctaagtgactgatgggaacaacaatctttgacattggttcagtattaagtgagatcgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320293 True 1624 lncRNA 0.45 2 19626229 19627968

Neighbor

gene id symbol gene type direction distance location
si:ch211-246m6.4 LOC103371115,LOC103149479,LOC104942297 coding upstream 19229 19602721 ~ 19607000 (+)
LOC120554004 NA coding upstream 26560 19585535 ~ 19599669 (+)
LOC120554051 xdh coding upstream 103560 19512902 ~ 19522669 (+)
zeb2b zeb2,LOC103355929 coding upstream 498575 19024148 ~ 19127654 (+)
orc4 orc4 coding upstream 1173227 18444179 ~ 18453002 (+)
sts sts coding downstream 84716 19712684 ~ 19732543 (+)
LOC120554574 NA coding downstream 188797 19816765 ~ 19818483 (+)
LOC120554006 NA coding downstream 191898 19819866 ~ 19832208 (+)
LOC120554605 pudp coding downstream 211637 19839605 ~ 19851954 (+)
LOC120554034 NA coding downstream 401058 20029026 ~ 20034729 (+)
G236041 NA non-coding upstream 1473 19623476 ~ 19624756 (+)
G236008 LOC101068829,LOC107082828,LOC108245120,LOC105419732,LOC107384676,LOC101480137,LOC102786663,LOC103457358,LOC100708708,LOC103371116 non-coding upstream 10049 19608374 ~ 19616180 (+)
G236007 NA non-coding upstream 18134 19607703 ~ 19608095 (+)
G235994 NA non-coding upstream 84636 19540075 ~ 19541593 (+)
G235993 NA non-coding upstream 88238 19537138 ~ 19537991 (+)
G236045 NA non-coding downstream 1472 19629440 ~ 19630393 (+)
G236046 NA non-coding downstream 2790 19630758 ~ 19631456 (+)
G236057 NA non-coding downstream 26859 19654827 ~ 19655106 (+)
G236060 NA non-coding downstream 29073 19657041 ~ 19657270 (+)
G236063 NA non-coding downstream 40021 19667989 ~ 19827821 (+)
G235778 NA other upstream 1444417 18176825 ~ 18181812 (+)
G235775 NA other upstream 1454275 18167286 ~ 18171954 (+)
LOC120554216 mpp4 other upstream 1660003 17953139 ~ 17966226 (+)
als2b NA other upstream 1687918 17882465 ~ 17938311 (+)
trnat-cgu_25 NA other upstream 2674460 16951697 ~ 16951769 (+)
anos1a LOC103358938 other downstream 43904 19671872 ~ 19698895 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 269124 19897092 ~ 19986729 (+)
G236162 NA other downstream 368831 19996799 ~ 19997667 (+)
prkx prkx other downstream 580361 20208329 ~ 20234852 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 727334 20355302 ~ 20377740 (+)

Expression


Co-expression Network