G236094


Basic Information

Item Value
gene id G236094
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19663910 ~ 19667992 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320355
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGATTAGTTTACCCTTTGAAAGTAATTACGGGGGAGACATGGGGAAACGGGGGGAGCGACGGTCCACTGCGAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGCTTGAGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA
>TU320356
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGCTTGAGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA
>TU320357
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGATTAGTTTACCCTTTGAAAGTAATTACGGGGGAGACATGGGGAAACGGGGGGAGCGACGGTCCACTGCGAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA
>TU320358
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA
>TU320359
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGATTTCATTAAGAGTTTAGGTCACCAGCTGATATCCTTGCAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGCTTGAGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA
>TU320360
ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGATTTCATTAAGAGTTTAGGTCACCAGCTGATATCCTTGCAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320355 True 656 lncRNA 0.52 8 19663910 19667992
TU320356 False 584 lncRNA 0.52 7 19663910 19667992
TU320357 False 650 lncRNA 0.52 8 19663910 19667992
TU320358 False 578 lncRNA 0.52 7 19663910 19667992
TU320359 False 626 lncRNA 0.51 7 19663910 19667992
TU320360 False 620 lncRNA 0.51 7 19663910 19667992

Neighbor

gene id symbol gene type direction distance location
aox6 NA coding downstream 9598 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 42259 19608622 ~ 19621651 (-)
kynu kynu,LOC102785701 coding downstream 82652 19551436 ~ 19581258 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding downstream 1140894 18465948 ~ 18523016 (-)
LOC120554003 LOC103370269 coding downstream 1261697 18357104 ~ 18402213 (-)
pnpla4 pnpla4 coding upstream 81079 19749071 ~ 19755969 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding upstream 707601 20375593 ~ 20380492 (-)
LOC120554635 LOC104961873,LOC103363323 coding upstream 774989 20442981 ~ 20456063 (-)
LOC120554361 NA coding upstream 1126354 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 1185573 20853565 ~ 20867800 (-)
G236055 NA non-coding downstream 28904 19634730 ~ 19635006 (-)
G236054 NA non-coding downstream 29555 19634104 ~ 19634355 (-)
G236053 NA non-coding downstream 29951 19633378 ~ 19633959 (-)
G236015 NA non-coding downstream 55557 19607629 ~ 19608353 (-)
G236032 NA non-coding downstream 77187 19584193 ~ 19586723 (-)
G236100 NA non-coding upstream 28476 19696468 ~ 19699078 (-)
G236103 NA non-coding upstream 52640 19720632 ~ 19722905 (-)
G236152 NA non-coding upstream 205185 19873177 ~ 19873387 (-)
G236155 nlgn4x non-coding upstream 245317 19913309 ~ 19913970 (-)
G236156 nlgn4 non-coding upstream 309830 19977822 ~ 19978682 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 134668 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 1224492 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 1336807 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 1918653 17734731 ~ 17745257 (-)
G235350 NA other downstream 2560393 17064302 ~ 17103517 (-)
G236111 sts,LOC108241831 other upstream 63327 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 699349 20367341 ~ 20368433 (-)
G236340 NA other upstream 1058411 20726403 ~ 20728427 (-)
G236349 NA other upstream 1092716 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 1175500 20843492 ~ 20853383 (-)

Expression


Co-expression Network